article Open AccessTop 1% cited
A general framework for estimating the relative pathogenicity of human genetic variants
Nature Genetics · 2014 · Vol. 46(3) · pp. 310–315
Martin Kircher✉(University of Washington)Daniela Witten(University of Washington)Preti Jain(HudsonAlpha Institute for Biotechnology)Brian J. O’Roak(University of Washington)Gregory M. Cooper(HudsonAlpha Institute for Biotechnology)Jay Shendure(University of Washington)
Genomics and Rare DiseasesGenetic Associations and EpidemiologyGenomics and Chromatin DynamicsBiologyAnnotationMissense mutationAlleleComputational biologyGeneticsHuman genetic variationHuman genomeTraitSingle-nucleotide polymorphism
MeSH terms
HumansModels, GeneticSelection, GeneticGenetic VariationGenome, HumanPolymorphism, Single NucleotideINDEL MutationGenome-Wide Association StudyMolecular Sequence AnnotationSupport Vector Machine
Funding
- National Institutes of Health
Citations
6,465
FWCI
325.28
field-weighted impact
References
64
Percentile
100%
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Citations per year
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References
Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, Condel
The American Journal of Human Genetics · 2011 · 774 citations
Trait-Associated SNPs Are More Likely to Be eQTLs: Annotation to Enhance Discovery from GWAS
PLoS Genetics · 2010 · 1,408 citations
Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++
PLoS Computational Biology · 2010 · 1,854 citations
A method and server for predicting damaging missense mutations
Nature Methods · 2010 · 13,461 citations
Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
Genome Research · 2012 · 1,236 citations
Base-Calling of Automated Sequencer Traces Using <i>Phred.</i> II. Error Probabilities
Genome Research · 1998 · 5,532 citations
SIFT: predicting amino acid changes that affect protein function
Nucleic Acids Research · 2003 · 6,783 citations
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
Genome Research · 2005 · 4,259 citations
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