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I-TASSER server for protein 3D structure prediction

BMC Bioinformatics · 2008 · Vol. 9(1) · pp. 40–40

Yang Zhang✉(University of Kansas)

Abstract

The I-TASSER server has been developed to generate automated full-length 3D protein structural predictions where the benchmarked scoring system helps users to obtain quantitative assessments of the I-TASSER models. The output of the I-TASSER server for each query includes up to five full-length models, the confidence score, the estimated TM-score and RMSD, and the standard deviation of the estimations. The I-TASSER server is freely available to the academic community at http://zhang.bioinformatics.ku.edu/I-TASSER.

Protein Structure and Dynamics Machine Learning in Bioinformatics Genomics and Phylogenetic StudiesCASPProtein structure predictionThreading (protein sequence)Computer scienceStructural bioinformaticsBenchmark (surveying)Cluster analysisProtein structureData miningSimilarity (geometry)

MeSH terms

Amino Acid SequenceComputer SimulationModels, ChemicalModels, MolecularMolecular Sequence DataProtein ConformationProteinsSoftwareSequence AlignmentInternetSequence Analysis, Protein

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