articleTop 1% cited
The Protein Data Bank
Nucleic Acids Research · 2000 · Vol. 28(1) · pp. 235–242
Helen M. Berman✉(Rutgers, The State University of New Jersey)
Abstract
The Protein Data Bank (PDB; http://www.rcsb.org/pdb/ ) is the single worldwide archive of structural data of biological macromolecules. This paper describes the goals of the PDB, the systems in place for data deposition and access, how to obtain further information, and near-term plans for the future development of the resource.
Protein Structure and DynamicsEnzyme Structure and FunctionBioinformatics and Genomic NetworksProtein Data Bank (RCSB PDB)Protein Data BankBiologyData bankResource (disambiguation)BioinformaticsComputer scienceProtein structureBiochemistry
MeSH terms
Magnetic Resonance SpectroscopyProtein ConformationProteinsDatabases, FactualInformation Storage and RetrievalInternet
Funding
- National Science Foundation
Citations
39,191
FWCI
250.74
field-weighted impact
References
53
Percentile
100%
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Citations per year
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References
The protein data bank: A computer-based archival file for macromolecular structures
Journal of Molecular Biology · 1977 · 8,620 citations
PROCHECK: a program to check the stereochemical quality of protein structures
Journal of Applied Crystallography · 1993 · 24,472 citations
The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids
Biophysical Journal · 1992 · 1,022 citations
The interpretation of protein structures: Estimation of static accessibility
Journal of Molecular Biology · 1971 · 5,866 citations
Improved tools for biological sequence comparison.
Proceedings of the National Academy of Sciences · 1988 · 11,317 citations
SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling
Electrophoresis · 1997 · 11,212 citations
RASMOL: biomolecular graphics for all
Trends in Biochemical Sciences · 1995 · 2,596 citations
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
Journal of Applied Crystallography · 1991 · 14,142 citations
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