Assessing the efficacy of microbial inoculants and consortia on growth, biomass and yield of Amaranth (Amaranthus caudatus L.) crop grown in saline soil of Lucknow
Abstract
Amaranthus (Amaranthus caudatus L., Amaranthaceae) is known to have high nutritional value with rich source of micronutrients and dietary minerals of both seeds and leaves. In the present study amaranth was sown in the experimental field at Babasaheb Bhimrao Ambedkar University in a randomized block design (RBD) for two subsequent years during the period from April 2021 to June 2022 and April 2022 to June 2023. The experimental treatments included the application of plant growth-promoting microbes, such as Bacillus filamentosus, Bacillus firmus, Aspergillus tamari, Aspergillus terreus, Aspergillus luchensis and Trichoderma lixii which were tested for their compatibility and colony- forming units. These microbes exhibited various plant growth-promoting activities such as phosphate solubilization, nitrogen fixation, IAA, ammonia and siderophore production. These microbes were firstly immobilised in organic amendments (bentonite, pressmud and molasses in 3:3:4 ratio as a carrier material) and then applied twice in the field at the time of seed sowing and after a month of sowing seed into the soil in comparison to a control of soil only without any microbial or chemical treatments. Moreover, the application of microbial bioinoculants, as consortia of Bacillus filamentosus + Bacillus firmus, Aspergillus luchensis + Trichoderma lixxi and Bacillus filamentosus + Trichoderma lixxi resulted in significant improvements in growth, biomass and yield responses than the untreated control plants.
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Introduction
Amaranthus (Amaranthus caudatus L., Amaranthaceae) is supposed to have high nutritional value with rich source of micronutrients and dietary minerals of both seeds and leaves (Venskutonis & Kraujalis, 2013 and Ghamery et al., 2017) [24,4] . Due to its resistance to heat, drought, salinity, diseases and pests, it has capability to survive under divergent agro-climatic conditions (Dako et al., 2014) [3] . Taxonomically, it is categorised under pseudo-cereal due to nutritional quality of its grains similar to cereals but produced by botanical families other than Gramineae (Mnkeni et al., 2007) [8] . Amaranth being a salinity tolerant crop contains adequate carbohydrates, protein and dietary fibre (Sarker et al., 2015 and 2020) [18,21] . Other than this, it is rich source of iron, copper, manganese, zinc, sodium, potassium, magnesium, boron, molybdenum, calcium, phosphorus, sulphur, betalains, betacyanin, β-carotene, betaxanthins, ascorbic acid, polyphenols and flavonoids etc (Ghamery et al., 2017) [4] . These constituents make it a crop with good antioxidant potential. Vegetable amaranth has good adaptability to different abiotic stresses like drought (Sarker & Oba, 2018) [19] and salinity (Sarker & Oba, 2019; Sarker et al., 2020) [20,21] . Nutritional deficiency including both of minerals and vitamins is a challenge especially among low-income earners. Amaranth as a vegetable and in the form of grain serves as a cost effective, affordable and reasonable solution to it. Amaranth being a crop with low production cost and its ability to survive even in the marginalised land, it is considered as the poor man's vegetable (Rastogi and Shukla 2013) [17] . It contains high lysine, methionine, tryptophan and sulphur containing amino acids. Amaranthus contains three times more vitamin C, calcium and niacin in comparison to spinach (Sarker, 2020 and Srivastava., R, 2011) [21,23] .
Amaranth seeds are rich in manganese, nickel, chromium, zinc, copper and selenium (Wolosik and Markowska; 2019) [25] . Amaranthus being rich source of various bioactive phytochemicals such as alkaloids, saponins, glycosides, phenolic acids, flavonoids, anthocyanins, amino acids, vitamins, minerals, terpenoids, lipids etc is preferably used for edible purposes as leafy vegetable. It also possesses various properties like antioxidant activity, anti-inflammatory and anti-cancer. Amaranth plant shows antioxidant activity due to the presence of phenolic acids and flavonoids by neutralizing free radicals. Amaranth grain contains vitamins (A, B 6 , C, E and K), dietary fibre (9-14%), proteins (13-22%), lipids (5-13%), minerals etc (Peter and Gandhi., 2017) [16] . Amaranthus spp. is underutilized in terms of its high nutritional value and lesser consumption in comparison to other green leafy vegetables. It is a sustainable food crop for the 21st century (Park et al., 2020) [11] . Amaranth grain, also known as Rama's grain or Rajgira in India, is highly nutritious and is a rich source of important amino acids like alanine, valine, leucine, methionine, phenylalanine, proline, arginine, α-amino butyric acid, tryptophan, isoleucine and serine which suggests that amaranth is a substitute to nutrient cereal (pseudo-cereal). As this plant have mechanism of C 4 photosynthesis that supports its better survival under stress conditions of heat and drought. Thus, this plant has immense potential to fill the nutrients gap of affecting vulnerable population inhabiting marginal land area (Park et al., 2020) [11] .
Materials and Methods
Collection of microbial strains
In the present study, six pre-isolated and well-characterized plant growth-promoting microbial strains were used. These strains include Bacillus flamentosus RS3B, Bacillus firmus RS7B, Aspergillus tamarii RS6F, Aspergillus terrus RS10F, Aspergillus luchensis RS8F and Trichoderma lixii TvR1. The bacteria and fungi used for this study were isolated from Ralegarh Siddi district, Maharashtra, India in 2018 (Kumar et al., 2021) [6] .
Revival and plant growth promoting characteristics of microbial inoculants (bacterial and fungal isolates)
The aforementioned microbial strains were revived using appropriate media under controlled laboratory conditions. The fungal strains were revived in potato dextrose agar while the bacterial strains were cultured in nutrient agar. This revival process was carried out at four months intervals under sterile in vitro conditions, utilizing a laminar flow hood, a rotary shaker and an incubator maintained at a constant temperature of 25 °C. The plant growth-promoting attributes of these microbes were assessed by testing for specific traits, including phosphate solubilization (Pikovskaya. 1948), indole-3-acetic acid (IAA) production (Bric, Bostock and Silverstone. 1991), siderophore production (Schwyn and Neilands. 1987), ammonia production (Cappuccino and Sherman, 1992), hydrogen cyanide (HCN) production (Lorck. 1948) and asymbiotic nitrogen fixation (assessed on nitrogen-free Jensen medium using standard procedures, as outlined in Table 1.
Compatibility test
The compatibility of different bacterial and fungal strains was assessed using various growth media. For the bacterial growth medium, 3.25 g of nutrient agar and for the fungal growth medium, 6 g of potato dextrose agar were used. To assess the compatibility of bacteria-fungus interactions, an equal ratio of nutrient broth (NB) and potato dextrose broth (PDB) was prepared and supplemented with 5% beef extract.
Colony forming unit (CFU) and immobilisation of bioformulation onto carrier material
Granular carrier-based bioformulations were prepared by immobilising freshly prepared microbial consortia (1 x 10 4 CFU) onto bentonite: pressmud: molasses mixture in 3:3:4 ratios where molasses act as a binding agent. This organic mixture was further autoclaved for checking any microbial growth. 100g of carrier material was used to immobilise 50ml of bioformulation that was applied in a plot of 12m 2 area. These granular bioformulations were spread in trays, autoclaved and then sealed in low-density polythene bags for storage (Maheshwari et al. 2015). For the chemical fertilizer treatment, 100g of diammonium phosphate (DAP) was applied to a 12m² area, following the guidelines set by the Indian Council of Agricultural Research (ICAR) and the methods outlined by Parveen et al. (2023) [13] . This experimental setup aimed to assess the effectiveness of the immobilized microbial treatments on amaranth growth and yield under field conditions. The microbial consortia used in this study refer to the combination of compatible microbial inoculants, which can include bacteriabacteria, fungus-fungus or bacteria-fungus combinations. These inoculants were immobilized on a carrier-based organic amendment after conducting compatibility tests to ensure their effectiveness when used together.
Site Selection, crop selection and sowing of seeds in saline soil
The experimental site for the amaranth field trial was located at the university health centre within the campus of Babasaheb Bhimrao Ambedkar University, Lucknow (26.8467ºN, 80.9462ºE). The field experiment was conducted using RBD (randomized block design) that is replicated thrice. In the present study, amaranth was grown under saline soil conditions (pH-8.1 and EC 5.42 ds/m) for two subsequent years during the period from April 2021 to June 2022 and April 2022 to June 2023. Hari cholai ganga variety of amaranth was purchased from organic bazaar and was selected for a field trial with a cultivation duration of three months. Amaranthus seeds were sown in month of April 2022 and harvested in the month of June 2023 for first year and April 2023 to June 2024 for the second year. This experimental setup aimed to evaluate the impact of microbial and chemical treatments on the growth and yield attributes of amaranth under saline conditions. Experimental plots measuring 2 x 2 (4 m²) each were used for planting the amaranth crop. To prevent the runoff of microbial treatments during the rainy season, the boundaries of each plot were surrounded by a 30 cm thick soil barrier. Additionally, a 1foot gap was maintained between adjacent plots to ensure proper spacing and to minimize any cross-contamination between treatments. Seeds were sown in the first week of April while crop was harvested at the end of June month. After checking their growth promoting attributes of isolated and revived PGPMs (plant growth promoting microbes) were firstly immobilised in organic amendments (bentonite, pressmud and molasses) were applied twice in the field at the time of seed sowing and after a month of seed sowing into the soil, in comparison to diammonium phosphate (DAP) as a chemical fertilizer and a control without any microbial or chemical treatments.
Estimation of plant growth and yield attributes of Amaranth
The parameters assessed for the growth of the crop included root length, shoot length and total length of plant, leaf parameters like length, width, leaf number and overall yield. Digital weighing balance was used to measure amount of final harvest. These measurements were taken to assess the impact of different treatments on the growth and productivity of the amaranth. These growth metrics were measured and compared against the control, which received no microbial and chemical treatments.
Statistical analysis
Statistical analysis was conducted using IBM SPSS Statistics version 20. To evaluate the significance of the treatments, a oneway analysis of variance (ANOVA) was performed followed by Duncan's multiple range test at a significance level of 5% (p < 0.05). This analysis was used to determine the impact of plant growth-promoting microbes (PGPMs) treatments on the growth and yield of amaranth under experimental field conditions. The results are presented as arithmetic means of three replicates microbial treatments with the standard errors to provide an indication of the variability in the data. This statistical approach ensured a robust assessment of the treatment effects and allowed for meaningful comparisons between different microbial treatments.
Results
PGPR attributes of microbial strains
Plant growth-promoting microbes (PGPMs) known for their ability to enhance plant growth through various beneficial mechanisms. The plant growth-promoting attributes of the bacterial and fungal isolates include the production of key bioactive compounds such as indole acetic acid (IAA), ammonia, phosphate, nitrogen, potassium and siderophores production, as given in Table 1. Among all microbial isolates, T. lixxi showed maximum growth promoting activities like IAA, ammonia, phosphate and siderophore production, followed by A. terreus showing IAA, ammonia, phosphate and siderophore production and B. filamentosus showing IAA, ammonia, nitrogen and siderophore production. Colony forming unit in bacterial inoculants and spore forming unit in fungal inoculants was checked after the use of carrier material. It was observed that carrier based organic amendments showed better results due to better binding of microbes with organic amendment that facilitated improvement in maintaining microbial population. So, while making consortia or any formulations use of carrier material played a very important role in terms of growth and yield of plants as it is observed to show plant growth promoting activities. These microbial isolates were subsequently evaluated for their colony-forming units (CFU) to assess their viability and effectiveness as shown in Table 2.
Compatibility test of microbial inoculants
The compatibility tests were essential for identifying compatible strains that could be used together in a microbial formulation or consortia. The experimental treatments included the application of plant growth-promoting microbes, such as B. filamentosus, B. firmus, A. tamari, A. terrus, A. luchensis and T. lixii which were tested for their compatibility and colony-forming units. Final compatible strains with positive compatibility test are mentioned as B. filamentosus with B. firmus, A. luchensis with T. lixxi and B. filamentosus with T. lixxi as shown in Table 3. Compatibility was assessed by observing the overlapping or inhibition zones between the microbes (Parveen et al., 2023) [13] . In the compatibility assessment, the zone of inhibition was used as an indicator of strain incompatibility. A distinct zone of inhibition, where microbial growth is prevented, was observed for noncompatible strains, indicating antagonistic interactions between the organisms. Conversely, compatible strains were characterized by overlapping zones, signifying a lack of antagonism and the establishment of a cooperative interaction between the microorganisms. The overlapping zones indicate that the strains were able to coexist in close proximity without inhibiting each other's growth, which is a key characteristic of compatibility. This method provided a clear visual representation of strain interactions, distinguishing between compatible and non-compatible pairings based on their growth patterns. The proper immobilisation of microbial inoculants onto suitable carrier materials enhanced the retention and stability of the microbes in the soil which improved the bioavailability of essential nutrients, thereby facilitating better nutrient uptake by the crop plants. The application of organic amendments containing immobilized microbial inoculants provides additional benefits by promoting sustainable agricultural practices and supporting enhanced growth of the crops.
Efficacy of microbial bioformulation on plant growth
Root length was measured to evaluate the development and health of the plant's root system, which is critical for nutrient and water absorption. Among the microbial combinations or carrier-based consortia, improvement in total length response was observed in increasing order as follows: RS3B + RS7B (243.30%), RS3B + TVR1 (314.24%) and RS8F + TVR1 (343.39%) in comparison to control which was untreated soil as shown in Table 4 and Fig 1 . These results are an average of two consecutive years with duration of 3-month harvest period, spanning from April to June as mentioned in Table 4 and Table 5. Table 5, Figure 2 and Figure 3 clearly shows leaf parameters like leaf length, leaf width and leaf number with increase value after consortia application. These consortia were found to be most effective in promoting growth compared to individual microbial treatments and control without any microbial treatment.
Efficacy of microbial bioformulation on amaranth biomass after harvest
Biomass was quantified by weighing oven dried amaranth plant thus reducing water content from fresh weight of amaranth plant. Among carrier based microbial consortia maximum percent increase in biomass was observed with the following combinations of bioformulation RS3B + TVR1 (397.19%) followed by RS8F + TVR1 (523.02%) and RS3B + RS7B (578.94%) in comparison to control without any microbial treatment. These results were obtained during the 3-month growing period, from April to June over two consecutive years, as shown in Table 6 andFig 4. These studies underline the positive impact of PGPR application on amaranth growth and productivity.
Efficacy of microbial bioformulation on amaranth yield after harvest
Yield was quantified by measuring the total production of edible amaranth leaves, providing an indicator of the crop's productivity under different treatment conditions. Among carrier based microbial consortia maximum percent increase in yield was observed with the following combinations RS3B + TVR1 (599.77%) followed by RS8F + TVR1 (536.56%) and RS3B + RS7B (402.95%) in comparison to control without any microbial treatment. These results were obtained during the 3-month growing period, from April to June over two consecutive years, as shown in Table 6 andFig 5. These studies underline the positive impact of PGPR application on amaranth growth and productivity.
Discussion
Amaranth being a salinity tolerant crop with potential of improving food and nutritional security in an era of climate change. One of the most common reasons for adopting this crop in an era of climate change is its survival capability in marginalised soil conditions with good nutritional potential. Our study on crop of Amaranthus caudatus L. with application of plant growth promoting microbes clearly signifies that it is rich source of macro as well as micro nutrients, so it can outstand as a good nutritional source, thus supporting sustainable crop production. This study corroborates with the finding of Parra-Cota et al., 2014 [12] who significantly reported that the longterm use of variable growth promoting rhizobacteria resulted in increased growth responses, improved plant biomass and enhanced seed yield in grain amaranth. They also reported that application of plant growth promoting microbes resulted in increased nitrogen use efficiency that supported enhanced growth and biomass. These results are strongly supported by finding of Lata et al., 2025 [7] in which B. filamentosus with B. firmus, A. luchensis with T. lixxi and B. filamentosus with T. lixxi in consortia resulted in enhancing growth and yield responses in cowpea crop. In accordance with the study of Pandey et al. (2018) [10] siderophore production by plant growth promoting bacteria, especially Bacillus has been attributed to enhance the availability of iron to the host plant by producing the siderophores resulting in better growth and yield of crop plant. The work carried out by Soumya et al., 2020 [22] on Pseudomonas fluorescens clearly represent the role of plant growth promoting rhizobacteria in positive responses for phosphate solubilization, nitrogen fixation, ammonia, indole-3acetic acid (IAA) and hydrogen cyanide (HCN) production. Similar results were also reported by Patel et al., 2023 [15] , use of salinity tolerant plant growth promoting bacteria help them to survive in salinity tolerant stress conditions and showed significant plant growth promoting properties that enhanced the growth of Amaranth crop. Results are supported by the findings of Parveen et al., 2024 [14] who reported increase in growth, biomass and yield of tomato plant after using the compatible combination of microbes with growth promoting traits. As seen in the findings of Ikhajiagbe et al., 2021 [5] , use of plant growth promoting microbes like Pseudomonas species resulted in improved and better growth responses in amaranth crop. In accordance to the findings of Chatterjee et al., co-inoculation or consortia of plant growth promoting microbes, in place of using single inoculation resulted in enhancing the growth and yield of plant. Different microbial inoculation with variable growth promoting traits resulted in better nutrients absorption that ultimately results in improving better and enhanced growth, yield responses of plant and sustainable solution to in stressful environment.
References
- Altekar N, Nayak G. Effect of biofield treatment on plant growth and adaptation. J Environ Health Sci. 2015;1:1-9.
- Chatterjee S, Sau GB, Sinha S, Mukherjee SK. Effect of coinoculation of plant growth-promoting rhizobacteria on the growth of amaranth plants. Arch Agron Soil Sci. 2011;1-11. doi:10.1080/03650340.2011.595002.
- Dako EGA, Sogbohossou OED, Maundu P. Current knowledge on Amaranthus spp.: research avenues for improved nutritional value and yield in leafy amaranths in sub-Saharan Africa. Euphytica. 2014;197:303-17. doi:10.1007/s10681-014-1081-9.
- Ghamery AAE, Sadek AM, Abdelbar OH. Comparative anatomical studies on some species of the genus Amaranthus (Family: Amaranthaceae) for the development of an identification guide. Ann Agric Sci. 2017;62:1-9. http://dx.doi.org/10.1016/j.aoas.2016.11.001.
- Ikhajiagbe B, Ogwu MC, Fawehinmi FO, Adekunle IJ. Comparative growth responses of Amaranthus [L.] species in Humus and Ferruginous Ultisols using plant growth promoting Rhizobacteria (Pseudomonas species). S Afr J Bot. 2021;137:10-8. https://doi.org/10.1016/j.sajb.2020.09.029.
- Kumar P, Mishra R, Dwivedi S, Singh RP. Occurrence of climate resilient plant growth promoting microbes in the semi-arid rocky plateau of Maharashtra, India. J Environ Sci Eng. 2021;63(1):1118-33.
- Lata S, Arora NK, Singh RP. Studies on plant growth promoting microbes and their consortia on growth, biomass, nodulation and yield with enhanced species richness in cowpea (Vigna unguiculata L.). Biochem Cell Arch. 2025;25(1):399-411. doi:10.51470/bca.2025.25.1.399.
- Mnkeni AP, Masika P, Maphaha M. Nutritional quality of vegetable and seed from different accessions of Amaranthus in South Africa. Water SA. 2007;33(3):377-80.
- Navarrete CV, Mendoza IVM, Martinez CC, Madrigal KYM, Alvarez JCM. Selection of rhizobacteria isolates with bioherbicide potential against Palmer amaranth (Amaranthus palmeri S. Wats.). Braz J Microbiol. 2021;52:1443-50. https://doi.org/10.1007/s42770-02100514-2.
- Pandey C, Negi YK, Maheshwari DK, Rawat D, Prabha D. Potential of native cold tolerant plant growth promoting bacilli to enhance nutrient use efficiency and yield of Amaranthus hypochondriacus. Plant Soil. 2018;428:307-20. https://doi.org/10.1007/s11104-018-3681-y.
- Park SJ, Sharma A, Lee HJ. A review of recent studies on the antioxidant activities of a third-millennium food: Amaranthus spp. Antioxidants. 2020;9:1236. doi:10.3390/antiox9121236.
- Parra-Cota FI, Cabriales JJP, Santos-Villalobos SDLS, Gallardo NAM, Frier JP. Burkholderia ambifaria and B. caribensis promote growth and increase yield in grain amaranth (Amaranthus cruentus and A. hypochondriacus) by improving plant nitrogen uptake. PLoS One. 2014;9(2). doi:10.1371/journal.pone.0088094.
- Parveen N, Mishra R, Singh D, Kumar P, Singh RP. Assessment of different carrier materials for the preparation of microbial formulations to enhance the shelf life and its efficacy on the growth of spinach (Spinacia oleracea L.). World J Microbiol Biotechnol. 2023;39:180. https://doi.org/10.1007/s11274-023-03594-4.
- Parveen N, Kouser F, Shah AA, Pant S, Azam R, Chand G, Singh RP. Utilizing bioformulation to increase root colonization, soil fertility, and productivity of chilli (Capsicum annuum L.). Int J Biosci. 2024;25(3):1-11. http://dx.doi.org/10.12692/ijb/25.3.1-11.
- Patel M, Vurukonda SSKP, Patel A. Multi-trait halotolerant plant growth-promoting bacteria mitigate induced salt stress and enhance growth of Amaranthus viridis. J Soil Sci Plant Nutr. 2023;23:1860-83. https://doi.org/10.1007/s42729-02301143-4.
- Peter K, Gandhi P. Rediscovering the therapeutic potential of Amaranthus species: A review. Egypt J Basic Appl Sci. 2017;4:196-205. http://dx.doi.org/10.1016/j.ejbas.2017.05.001.
- Rastogi A, Shukla S. Amaranth: a new millennium crop of nutraceutical values. Crit Rev Food Sci Nutr. 2013;53:10925. doi:10.1080/10408398.2010.517876.
- Sarker U, Islam MT, Rabbani MG, Oba S. Variability, heritability and genetic association in vegetable amaranth (Amaranthus tricolor). Span J Agric Res. 2015;13:1-8. doi:10.5424/sjar/2015132-6843.
- Sarker U, Oba S. Drought stress enhances nutritional and bioactive compounds, phenolic acids and antioxidant capacity of Amaranthus leafy vegetable. BMC Plant Biol. 2018;18:258. doi:10.1186/s12870-018-1484-1.
- Sarker U, Oba S. Salinity stress enhances colour parameters, bioactive leaf pigments, vitamins, polyphenols, flavonoids and antioxidant activity in selected Amaranthus leafy vegetables. J Sci Food Agric. 2019;99(5):2275-84. doi:10.1002/jsfa.9423.
- Sarker U, Hossain MN, Iqbal MA, Oba S. Bioactive components and radical scavenging activity in selected advance lines of salt-tolerant vegetable amaranth. Front Nutr. 2020;7:587257. doi:10.3389/fnut.2020.587257.
- Soumya S, Sreejith S, Shad KS, Anusha P, Swathy B, Renikrishna R, et al. Combined effect of Pseudomonas spp. consortium and fertilizer with micronutrients on enhanced yield of Amaranthus tricolor (L.). Proc Natl Acad Sci India B Biol Sci. 2020;90(1):1083-92. https://doi.org/10.1007/s40011-020-01179-x.
- Srivastav R. Nutritional quality of some cultivated and wild species of Amaranthus L. Int J Pharm Sci Res. 2011;2(12):3152-6.
- Venskutonis PR, Kraujalis P. Nutritional components of amaranth seeds and vegetables: A review on composition, properties, and uses. Compr Rev Food Sci Food Saf. 2013;12(4):381-412. https://doi.org/10.1111/1541-4337.1202.
- Wolosik A, Markowska A. Amaranthus cruentus: taxonomy, botanical description, and review of its seed chemical composition. Nat Prod Commun. 2019;1-10. doi:10.1177/1934578X19844141.
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