article Open AccessTop 1% cited
iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data
BMC Bioinformatics · 2018 · Vol. 19(1) · pp. 534–534
Xijin Ge✉(South Dakota State University)Eun Son(South Dakota State University)Runan Yao(South Dakota State University)
Abstract
Combining comprehensive analytic functionalities with massive annotation databases, iDEP ( http://ge-lab.org/idep/ ) enables biologists to easily translate transcriptomic and proteomic data into actionable insights.
Cancer-related molecular mechanisms researchRNA modifications and cancerMolecular Biology Techniques and ApplicationsBioconductorRNA-SeqComputational biologyTranscriptomeBiologymicroRNAKEGGComputer scienceGeneGene expression
MeSH terms
Homeobox A1 ProteinAnimalsB-LymphocytesCells, CulturedFibroblastsGene Expression RegulationHumansLungSoftwareTranscription FactorsTumor Suppressor Protein p53Sequence Analysis, RNAHomeodomain ProteinsComputational BiologyGene Expression Profiling
Funding
- National Science Foundation
- National Institutes of Health
- National Institute of General Medical Sciences
- Office of Experimental Program to Stimulate Competitive Research
Citations
1,671
FWCI
24.62
field-weighted impact
References
150
Percentile
100%
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