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J

J. Gregory Caporaso

University of PennsylvaniaORCID https://orcid.org/0000-0002-8865-1670

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Publications

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Citations

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Impact (2-yr)

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Top Publications

QIIME allows analysis of high-throughput community sequencing data

Nature Methods201035,655 citationsFirst authorCorresponding

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Nature Biotechnology201922,942 citations

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

Proceedings of the National Academy of Sciences20109,826 citationsFirst authorCorresponding

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

Nature Biotechnology20139,204 citations

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

The ISME Journal20128,975 citationsFirst author

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

Nature Methods20124,344 citationsCorresponding

Soil bacterial and fungal communities across a pH gradient in an arable soil

The ISME Journal20104,057 citations

PyNAST: a flexible tool for aligning sequences to a template alignment

Bioinformatics20093,457 citationsFirst authorCorresponding

Current understanding of the human microbiome

Nature Medicine20182,573 citations

Best practices for analysing microbiomes

Nature Reviews Microbiology20181,823 citations

Species-level functional profiling of metagenomes and metatranscriptomes

Nature Methods20181,723 citations

Examining the global distribution of dominant archaeal populations in soil

The ISME Journal20101,304 citations

Moving pictures of the human microbiome

Genome biology20111,166 citationsFirst authorCorresponding

Cohabiting family members share microbiota with one another and with their dogs

eLife20131,113 citations

Defining seasonal marine microbial community dynamics

The ISME Journal20111,047 citations

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys

The ISME Journal2011620 citations

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

Environmental Microbiology2010605 citations