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Research article · 2026 · Full text

International Journal of Advanced Chemistry Research

Salicylic Acid and Jasmonic Acid Crosstalk in Mediating Plant Defense Responses Against Biotrophic Pathogens

Carlos Eduardo MendesFernanda Oliveira SantosRicardo Almeida da Costa

Volume 8(7) · Pages 63–67 · DOI: 10.33545/26646781.2026.v8.i7a.719 ↗

Research areasPlant-Microbe Interactions and ImmunityInsect-Plant Interactions and ControlPlant Pathogenic Bacteria Studies

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Abstract

Author-written

Salicylic acid (SA) and jasmonic acid (JA) represent two principal hormonal mediators governing distinct yet interconnected plant defense pathways. This research investigated the interactive effects of exogenous SA and JA application on defense gene expression, metabolite accumulation, and pathogen suppression in tomato (Solanum lycopersicum L.) challenged with Pseudomonas syringae pv. tomato DC3000. Experiments were conducted at the São Paulo Institute of Plant Sciences, Brazil, using a completely randomized design with seven treatments including individual and combined hormone applications at 0.5 mM and 1.0 mM concentrations. Combined SA and JA treatment at 1.0 mM produced the highest PR-1 upregulation (7.8-fold) and greatest pathogen suppression, reducing bacterial populations by approximately 690-fold compared to controls. Phenolic compounds constituted 28% of defense metabolites, and a strong positive correlation (R² = 0.91) was established between SA concentration and pathogen growth inhibition. These findings demonstrate that SA-JA antagonism can be overcome at specific concentrations, offering practical implications for hormonal biocontrol strategies in tropical agriculture.

Summary

Source-checked

Plain-language reading of the full paper, prepared with AI and checked against the text. Each point links to the authors' own words.

  1. Why it matters

    • Plants use salicylic acid (SA) to fight biotrophic pathogens and jasmonic acid (JA) to defend against necrotrophic organisms. View evidence ↗

      Why it matters

      Plants use salicylic acid (SA) to fight biotrophic pathogens and jasmonic acid (JA) to defend against necrotrophic organisms.

      In the paper's own words

      “SA predominantly mediates resistance against biotrophic pathogens through activation of pathogenesis-related (PR) gene expression and systemic acquired resistance (SAR), while JA governs defenses against necrotrophic organisms”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • SA and JA typically have an antagonistic relationship, meaning the activation of one hormone often suppresses the other. View evidence ↗

      Why it matters

      SA and JA typically have an antagonistic relationship, meaning the activation of one hormone often suppresses the other.

      In the paper's own words

      “The antagonistic relationship between SA and JA pathways represents one of the most documented instances of hormonal crosstalk, wherein activation of one pathway frequently suppresses the other”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • The molecular mechanisms of SA-JA crosstalk during pathogen challenges are not yet fully understood in tropical crop species. View evidence ↗

      Why it matters

      The molecular mechanisms of SA-JA crosstalk during pathogen challenges are not yet fully understood in tropical crop species.

      In the paper's own words

      “Despite extensive investigation, molecular mechanisms governing SA-JA crosstalk during simultaneous pathogen challenge remain incompletely understood in tropical crop species”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
  2. The question

    • The study aimed to evaluate how individual and combined applications of SA and JA affect gene expression, metabolites, and the suppression of P. syringae pv. tomato DC3000 in tomato plants. View evidence ↗

      The question

      The study aimed to evaluate how individual and combined applications of SA and JA affect gene expression, metabolites, and the suppression of P. syringae pv. tomato DC3000 in tomato plants.

      In the paper's own words

      “This research therefore evaluated individual and combined effects of exogenous SA and JA application on defense gene expression, metabolite accumulation, and pathogen suppression in tomato plants challenged with P. syringae pv. tomato DC3000.”

      Page 2

      Found in: Introduction

      Read it in the full textOpen PDF at page 2 ↗
  3. What they did

    • The study used a randomized design with seven treatments: a control, SA (0.5 and 1.0 mM), JA (0.5 and 1.0 mM), and combined SA+JA (0.5 and 1.0 mM), with four replications each. View evidence ↗

      What they did

      The study used a randomized design with seven treatments: a control, SA (0.5 and 1.0 mM), JA (0.5 and 1.0 mM), and combined SA+JA (0.5 and 1.0 mM), with four replications each.

      In the paper's own words

      “The experimental design followed a completely randomized arrangement with seven treatments and four replications. ... Treatments comprised: (T1) control, (T2) SA 0.5 mM, (T3) SA 1.0 mM, (T4) JA 0.5 mM, (T5) JA 1.0 mM, (T6) SA+JA 0.5 mM, and (T7) SA+JA 1.0 mM.”

      Page 2

      Found in: Methods

      Read it in the full textOpen PDF at page 2 ↗
    • Four-week-old seedlings were treated with hormones and then inoculated 24 hours later with a pathogen suspension of 1 × 10⁸ CFU/mL. View evidence ↗

      What they did

      Four-week-old seedlings were treated with hormones and then inoculated 24 hours later with a pathogen suspension of 1 × 10⁸ CFU/mL.

      In the paper's own words

      “Four-week-old seedlings were sprayed with hormone solutions and inoculated 24 hours later with pathogen suspension (1 × 10⁸ CFU/mL) by pressure infiltration”

      Page 2

      Found in: Methods

      Read it in the full textOpen PDF at page 2 ↗
    • Gene expression for PR-1, PDF1.2, WRKY70, and NPR1 was measured using RT-qPCR at various time points up to 72 hours post-inoculation. View evidence ↗

      What they did

      Gene expression for PR-1, PDF1.2, WRKY70, and NPR1 was measured using RT-qPCR at various time points up to 72 hours post-inoculation.

      In the paper's own words

      “Defense gene expression was quantified by RT-qPCR at 12, 24, 48, and 72 hours post-inoculation (hpi). Target genes included PR-1, PDF1.2, WRKY70, and NPR1, with Actin-7 as reference.”

      Page 2

      Found in: Methods

      Read it in the full textOpen PDF at page 2 ↗
  4. What they found

    • The combined 1.0 mM SA+JA treatment resulted in the highest PR-1 gene expression (7.8-fold increase), surpassing the 6.2-fold increase from 1.0 mM SA alone. View evidence ↗

      What they found

      The combined 1.0 mM SA+JA treatment resulted in the highest PR-1 gene expression (7.8-fold increase), surpassing the 6.2-fold increase from 1.0 mM SA alone.

      In the paper's own words

      “Combined SA+JA at 1.0 mM produced the highest PR-1 expression (7.8-fold increase), followed by individual SA at 1.0 mM (6.2-fold).”

      Page 2

      Found in: Results

      Read it in the full textOpen PDF at page 2 ↗
    • PDF1.2 expression was highest with 1.0 mM JA (6.8-fold) and lower with the combined treatment (4.5-fold), showing that SA partially antagonizes JA signaling. View evidence ↗

      What they found

      PDF1.2 expression was highest with 1.0 mM JA (6.8-fold) and lower with the combined treatment (4.5-fold), showing that SA partially antagonizes JA signaling.

      In the paper's own words

      “The JA-responsive gene PDF1.2 showed maximal expression under JA 1.0 mM treatment (6.8-fold), with combined treatment producing lower PDF1.2 expression (4.5-fold), indicating partial SA-mediated antagonism of JA signaling.”

      Page 2

      Found in: Results

      Read it in the full textOpen PDF at page 2 ↗
    • There was a strong positive correlation (R² = 0.91) between SA concentration and pathogen inhibition, which plateaued at concentrations above 2.0 mM. View evidence ↗

      What they found

      There was a strong positive correlation (R² = 0.91) between SA concentration and pathogen inhibition, which plateaued at concentrations above 2.0 mM.

      In the paper's own words

      “A strong positive correlation (R² = 0.91) between SA concentration and pathogen inhibition followed a logarithmic saturation curve, plateauing above 2.0 mM”

      Page 4

      Found in: Discussion

      Read it in the full textOpen PDF at page 4 ↗
  5. What it means

    • The authors conclude that the typical antagonism between SA and JA can be overcome at specific concentrations, which may help in developing sustainable crop protection. View evidence ↗

      What it means

      The authors conclude that the typical antagonism between SA and JA can be overcome at specific concentrations, which may help in developing sustainable crop protection.

      In the paper's own words

      “These findings demonstrate that SA-JA antagonism can be overcome at specific concentrations, offering promising approaches for sustainable crop protection.”

      Page 4

      Found in: Conclusion

      Read it in the full textOpen PDF at page 4 ↗
    • The authors state that future research is needed to test these results in field conditions, check the durability of the resistance, and assess economic feasibility. View evidence ↗

      What it means

      The authors state that future research is needed to test these results in field conditions, check the durability of the resistance, and assess economic feasibility.

      In the paper's own words

      “Future investigations should extend these findings to field conditions, examine resistance durability, and evaluate economic feasibility within integrated pest management frameworks.”

      Page 4

      Found in: Conclusion

      Read it in the full textOpen PDF at page 4 ↗

Visual summary

3 visuals

Illustrations explain the paper; charts are replotted from the paper's own table values.

AI-generated illustration
AI-generated conceptual illustration (Arabidopsis thaliana plants). It explains the idea and does not show study data.↗ Enlarge
SA-JA Interaction Shift
AI-generated conceptual illustration (Arabidopsis thaliana plants). It explains the idea and does not show study data.

AI-generated conceptual illustration (Arabidopsis thaliana plants). It explains the idea and does not show study data.

Open full-size image ↗

SA-JA Interaction Shift

AI-generated conceptual illustration (Arabidopsis thaliana plants). It explains the idea and does not show study data.

View source evidence ↗
Replotted from source data
Replotted from Table 1 (page 2) of the original paper. Every bar is the paper's own table value.↗ Enlarge
PR-1 and PDF1.2 and more: Control vs SA (0.5 mM) vs SA (1.0 mM) vs JA (0.5 mM) vs JA (1.0 mM)
Replotted from Table 1 (page 2) of the original paper. Every bar is the paper's own table value.

Replotted from Table 1 (page 2) of the original paper. Every bar is the paper's own table value.

Open full-size image ↗

PR-1 and PDF1.2 and more: Control vs SA (0.5 mM) vs SA (1.0 mM) vs JA (0.5 mM) vs JA (1.0 mM)

Replotted from Table 1 (page 2) of the original paper. Every bar is the paper's own table value.

View source evidence ↗
Replotted from source data
Replotted from Table 2 (page 3) of the original paper. Every bar is the paper's own table value.↗ Enlarge
Mean: Control vs SA (0.5 mM) vs SA (1.0 mM) vs JA (0.5 mM) vs JA (1.0 mM)
Replotted from Table 2 (page 3) of the original paper. Every bar is the paper's own table value.

Replotted from Table 2 (page 3) of the original paper. Every bar is the paper's own table value.

Open full-size image ↗

Mean: Control vs SA (0.5 mM) vs SA (1.0 mM) vs JA (0.5 mM) vs JA (1.0 mM)

Replotted from Table 2 (page 3) of the original paper. Every bar is the paper's own table value.

View source evidence ↗

Figures & tables

From the original paper
Defense gene expression levels (fold change) at 48 hpi under different hormonal treatmentsTable 1Page 2Comparative defense gene expression (PR-1 and PDF1.2) across hormonal treatments at 48 hpiFigure 1Page 2Pathogen population density (log₁₀ CFU/cm²) at 72 hpiTable 2Page 3Distribution of defense-related metabolite classes under combined SA+JA treatment (1.0 mM)Figure 2Page 3Correlation between SA concentration and pathogen growth inhibition at 72 hpiFigure 3Page 3
FULL TEXT Original article · reflowed for reading

Introduction

How do plants effectively coordinate their immune responses when simultaneously confronted with multiple pathogenic threats? This question has driven decades of phytopathological research and remains central to understanding plant defense regulation. Plants have evolved sophisticated innate immune systems relying on hormonal signaling networks, among which salicylic acid (SA) and jasmonic acid (JA) have emerged as the most extensively characterized defense mediators [1,2] . SA predominantly mediates resistance against biotrophic pathogens through activation of pathogenesis-related (PR) gene expression and systemic acquired resistance (SAR), while JA governs defenses against necrotrophic organisms [3] . The SA signaling pathway activates molecular events culminating in PR gene expression through the NPR1 master regulator, which undergoes conformational changes upon SA perception enabling nuclear translocation and transcriptional activation [4,5] . Conversely, JA signaling involves perception of JA-Ile by the COI1-JAZ receptor complex, leading to proteasomal degradation of JAZ repressors and derepression of MYC transcription factors [6] . The antagonistic relationship between SA and JA pathways represents one of the most documented instances of hormonal crosstalk, wherein activation of one pathway frequently suppresses the other [7] . Despite extensive investigation, molecular mechanisms governing SA-JA crosstalk during simultaneous pathogen challenge remain incompletely understood in tropical crop species [8,9] . The potential for combined hormonal treatments achieving superior disease suppression compared to individual applications has received limited attention for biotrophic pathogen management in tomato cultivation [10] . This research therefore evaluated individual and combined effects of exogenous SA and JA application on defense gene expression, metabolite accumulation, and pathogen suppression in tomato plants challenged with P. syringae pv. tomato DC3000.

Phytohormone signaling mechanisms

SA biosynthesis occurs primarily through the isochorismate pathway catalyzed by ICS enzymes, with ICS1 contributing approximately 90% of pathogen-induced SA production [11] . Upon accumulation, SA induces NPR1 monomerization through thioredoxin-mediated reduction of disulfide bonds, enabling nuclear import and defense gene activation [12] . JA biosynthesis initiates in chloroplast membranes through the octadecanoid pathway, beginning with alpha-linolenic acid release and sequential oxidation producing OPDA, which undergoes beta-oxidation to yield jasmonic acid [13] . Conjugation with isoleucine by JAR1 produces bioactive JA-Ile for COI1-JAZ receptor activation [6] . The convergence and mutual regulation of these two biosynthetic and signaling pathways determine the net defensive output of the plant immune system against diverse pathogen types.

Material and Methods

Material and Methods

Material

The experimental material comprised tomato (Solanum lycopersicum L.) cultivar "Santa Cruz Kada" seedlings from a certified supplier in São Paulo, Brazil. Seeds were surfacesterilized with 1.5% sodium hypochlorite for 10 minutes and germinated in autoclaved vermiculite-perlite mixture (2:1 v/v). The pathogen Pseudomonas syringae pv. tomato DC3000 was obtained from the culture collection of the Department of Plant Pathology, São Paulo Institute of Plant Sciences. SA (≥99% purity) and JA (≥95% purity) from Sigma-Aldrich were prepared as DMSO stock solutions diluted in sterile distilled water with 0.01% Tween-20.

Methods

This research was conducted at greenhouse and molecular biology facilities of the São Paulo Institute of Plant Sciences, São Paulo, Brazil, from March to November 2023. The experimental design followed a completely randomized arrangement with seven treatments and four replications. Ethics approval was obtained from the Institutional Biosafety Committee (Protocol No. IBC-2023-047). Treatments comprised: (T1) control, (T2) SA 0.5 mM, (T3) SA 1.0 mM, (T4) JA 0.5 mM, (T5) JA 1.0 mM, (T6) SA+JA 0.5 mM, and (T7) SA+JA 1.0 mM. Four-week-old seedlings were sprayed with hormone solutions and inoculated 24 hours later with pathogen suspension (1 × 10⁸ CFU/mL) by pressure infiltration [14] . Defense gene expression was quantified by RT-qPCR at 12, 24, 48, and 72 hours postinoculation (hpi). Target genes included PR-1, PDF1.2, WRKY70, and NPR1, with Actin-7 as reference. Relative expression was calculated using the 2⁻ᐩᐩCt method. Pathogen growth was assessed by serial dilution plating at 0, 24, 48, and 72 hpi. Defense metabolite profiling was conducted by HPLC analysis at 48 hpi [15] . Statistical analysis employed ANOVA with Tukey's HSD test at P ≤ 0.05 using R version 4.3.1.

Results

Hormonal treatments produced significant (P < 0.05) alterations in defense gene expression compared to controls. Combined SA+JA at 1.0 mM produced the highest PR-1 expression (7.8-fold increase), followed by individual SA at 1.0 mM (6.2-fold). The JA-responsive gene PDF1.2 showed maximal expression under JA 1.0 mM treatment (6.8-fold), with combined treatment producing lower PDF1.2 expression (4.5-fold), indicating partial SA-mediated antagonism of JA signaling. The divergent expression profiles confirm the antagonistic relationship between SA and JA pathways while revealing that combined treatments achieve elevated expression of both markers, with preferential SA-responsive gene enhancement at higher concentrations.

Pathogen recognition and immune activation

Pattern-triggered immunity (PTI) initiates upon perception of PAMPs by membrane-localized PRRs, activating MAPK cascades, calcium signaling, and ROS production [3] . The flagellin epitope flg22 recognized by FLS2 triggers SA biosynthesis activation and basal defense establishment [4] . Effector-triggered immunity (ETI) amplifies PTI through NLR receptor-mediated recognition of pathogen effectors, characteristically producing hypersensitive response and robust SA accumulation [16] . The experimental results indicate that exogenous SA primes the signaling pathway for more rapid activation upon pathogen perception, lowering the effective defense threshold against P. syringae pv. tomato DC3000 in treated tomato plants.

Discussion

The finding that combined SA+JA at 1.0 mM produced the highest PR-1 expression (7.8-fold) and greatest pathogen suppression challenges the conventional paradigm of strict SA-JA antagonism [7] . These results align with Tamaoki et al. (2013) who reported synergistic PR gene enhancement under combined treatment in Arabidopsis [8] , extending those findings to a commercially important tropical crop. The mechanism likely involves concentration-dependent WRKY70 regulation, functioning as an integrator rather than binary switch at moderate concentrations [11] . This has significant implications for biocontrol strategies, suggesting calibrated combined applications could achieve superior protection. The differential PDF1.2 suppressions under combined treatment (4.51-fold versus 6.82-fold with JA alone) confirms partial SA-mediated JA antagonism persists even under synergistic conditions, consistent with Spoel et al. (2007) [4] . However, the partial nature contrasts with nearcomplete JA inhibition reported in Arabidopsis, possibly reflecting species-specific regulatory differences [9,12] . Combined applications may therefore simultaneously enhance biotrophic resistance while maintaining partial necrotrophic defense capacity. The metabolite data showing phenolic compound dominance (28%) reflects convergent phenylpropanoid pathway activation by both signals, consistent with Dempsey et al. (2011) [7] . The strong SA-pathogen inhibition correlation (R² = 0.91) with plateau above 2.0 mM suggests NPR1 signaling saturation at high SA levels, providing guidance for economically optimal application rates [13,15] . Future investigations should determine whether foliar SA application between 1.0-2.0 mM provides optimal balance between defense activation and pathogen suppression under field conditions.

Conclusion

This research evaluated SA and JA interactive effects on defense against biotrophic pathogens in tomato. Combined SA+JA at 1.0 mM achieved synergistic PR-1 enhancement (7.8-fold) and the greatest pathogen suppression, reducing bacterial populations approximately 690-fold compared to controls. A strong dose-response correlation (R² = 0.91) was established between SA concentration and pathogen inhibition. These findings demonstrate that SA-JA antagonism can be overcome at specific concentrations, offering promising approaches for sustainable crop protection. Future investigations should extend these findings to field conditions, examine resistance durability, and evaluate economic feasibility within integrated pest management frameworks.

Acknowledgement

AcknowledgementsThis research was supported by a grant from the Brazilian National Council for Scientific and Technological Development (CNPq), Grant No. 402187/2023-5. The authors acknowledge the São Paulo Institute of Plant Sciences for providing greenhouse facilities and laboratory access. C.E.M. conceived the experimental design and drafted the manuscript. F.O.S. performed molecular analyses. R.A.C. conducted metabolite profiling and statistical analyses.

Figures and tables from the paper

Table 1. Defense gene expression levels (fold change) at 48 hpi under different hormonal treatments
TreatmentPR-1PDF1.2WRKY70
Control1.00 ± 0.121.00 ± 0.091.00 ± 0.11
SA (0.5 mM)3.82 ± 0.411.28 ± 0.152.94 ± 0.33
SA (1.0 mM)6.21 ± 0.581.61 ± 0.194.37 ± 0.45
JA (0.5 mM)1.47 ± 0.184.19 ± 0.471.85 ± 0.22
JA (1.0 mM)2.11 ± 0.246.82 ± 0.712.53 ± 0.28
SA+JA (0.5 mM)4.93 ± 0.523.12 ± 0.354.76 ± 0.49
SA+JA (1.0 mM)7.81 ± 0.734.51 ± 0.486.18 ± 0.62

Table text extracted from the original PDF; superscript letters are shown inline. The original table image is below.

View original table image
Defense gene expression levels (fold change) at 48 hpi under different hormonal treatments↗ Enlarge
Table 1
Defense gene expression levels (fold change) at 48 hpi under different hormonal treatments

Defense gene expression levels (fold change) at 48 hpi under different hormonal treatments

Open full-size image ↗
Original paper tableSource PDF · page 2 ↗
Figure 1. Comparative defense gene expression (PR-1 and PDF1.2) across hormonal treatments at 48 hpi
Comparative defense gene expression (PR-1 and PDF1.2) across hormonal treatments at 48 hpi↗ Enlarge
Figure 1
Comparative defense gene expression (PR-1 and PDF1.2) across hormonal treatments at 48 hpi

Comparative defense gene expression (PR-1 and PDF1.2) across hormonal treatments at 48 hpi

Open full-size image ↗
Original paper figureSource PDF · page 2 ↗
Table 2. Pathogen population density (log₁₀ CFU/cm²) at 72 hpi
TreatmentMeanSDRangeP-value
Control7.420.386.89–7.95—
SA (0.5 mM)6.180.295.78–6.540.003
SA (1.0 mM)5.310.344.82–5.71<0.001
JA (0.5 mM)6.850.426.31–7.380.041
JA (1.0 mM)6.230.355.74–6.680.008
SA+JA (0.5 mM)5.670.315.21–6.08<0.001
SA+JA (1.0 mM)4.580.274.19–4.92<0.001

Table text extracted from the original PDF; superscript letters are shown inline. The original table image is below.

View original table image
Pathogen population density (log₁₀ CFU/cm²) at 72 hpi↗ Enlarge
Table 2
Pathogen population density (log₁₀ CFU/cm²) at 72 hpi

Pathogen population density (log₁₀ CFU/cm²) at 72 hpi

Open full-size image ↗
Original paper tableSource PDF · page 3 ↗
Figure 2. Distribution of defense-related metabolite classes under combined SA+JA treatment (1.0 mM)
Distribution of defense-related metabolite classes under combined SA+JA treatment (1.0 mM)↗ Enlarge
Figure 2
Distribution of defense-related metabolite classes under combined SA+JA treatment (1.0 mM)

Distribution of defense-related metabolite classes under combined SA+JA treatment (1.0 mM)

Open full-size image ↗
Original paper figureSource PDF · page 3 ↗
Figure 3. Correlation between SA concentration and pathogen growth inhibition at 72 hpi
Correlation between SA concentration and pathogen growth inhibition at 72 hpi↗ Enlarge
Figure 3
Correlation between SA concentration and pathogen growth inhibition at 72 hpi

Correlation between SA concentration and pathogen growth inhibition at 72 hpi

Open full-size image ↗
Original paper figureSource PDF · page 3 ↗

References

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  8. Tamaoki D, Seo S, Yamada S, Kano A, Miyamoto A, et al. Jasmonic acid and salicylic acid activate a common defense system in rice. Plant Signal Behav. 2013;8(6):e24260.
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