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Research article · 2024 · Full text

International Journal of Advanced Biochemistry Research

Enhancing rice resilience to zinc deficiency: Insights from leaf and seed zinc accumulation, glutathione reductase activity and hydrogen peroxide

T. K. Nagarathna

Volume 8(1S) · Pages 435–439 · DOI: 10.33545/26174693.2024.v8.i1sg.366 ↗

Research areasPlant Micronutrient Interactions and EffectsAgricultural Science and FertilizationAluminum toxicity and tolerance in plants and animals

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Abstract

Author-written

The experiment was conducted to investigate the responses of two rice genotypes, IR 74 (sensitive) and RIL 46 (efficient), to zinc deficiency. Grown in both field and controlled conditions, the experiment aimed to understand the physiological and biochemical factors influencing their responses for developing zinc-efficient rice varieties. Under normal zinc conditions, both genotypes exhibited superior root systems, but zinc deficiency hindered root growth, more so in IR 74. RIL 46 showed enhanced zinc uptake and translocation under both conditions, maintaining higher zinc content in grains. Glutathione Reductase (GR) enzyme activity in leaves revealed a strategic response in RIL 46 to mitigate oxidative damage under zinc deficiency. Hydrogen peroxide accumulation in roots indicated a heightened oxidative stress response in the sensitive line. In conclusion, RIL 46 demonstrated genetic resilience to zinc deficiency, emphasizing the importance of zinc accumulation, GR activity and hydrogen peroxide levels as indicators for selecting resilient rice varieties in zinc-limiting environments.

Summary

Source-checked

Plain-language reading of the full paper, prepared with AI and checked against the text. Each point links to the authors' own words.

  1. Why it matters

    • Zinc is a critical micronutrient for plants, supporting various biochemical and physiological functions. View evidence ↗

      Why it matters

      Zinc is a critical micronutrient for plants, supporting various biochemical and physiological functions.

      In the paper's own words

      “Zinc (Zn) is an essential micronutrient for plants, plays a crucial role in various physiological and biochemical processes.”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • Zinc deficiency is a major global health concern, affecting approximately two billion people according to the WHO. View evidence ↗

      Why it matters

      Zinc deficiency is a major global health concern, affecting approximately two billion people according to the WHO.

      In the paper's own words

      “The World Health Organization (WHO) estimates that around two billion people worldwide suffer from Zn deficiency.”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • Rice is a primary calorie source for many, especially in Asia, but it is often deficient in micronutrients like zinc. View evidence ↗

      Why it matters

      Rice is a primary calorie source for many, especially in Asia, but it is often deficient in micronutrients like zinc.

      In the paper's own words

      “Rice is a major staple food for a significant portion of the world's population, particularly in Asia where it serves as a primary source of calories. However, rice is known to be deficient in certain micronutrients, including zinc”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
  2. The question

    • The study aimed to identify the physiological and biochemical factors that allow certain rice varieties to be more efficient with zinc to aid breeding programs. View evidence ↗

      The question

      The study aimed to identify the physiological and biochemical factors that allow certain rice varieties to be more efficient with zinc to aid breeding programs.

      In the paper's own words

      “The goal was to study the physiological and biochemical factors influencing these responses, providing valuable insights for the development of zinc-efficient rice varieties through breeding programs”

      Page 2

      Found in: Introduction

      Read it in the full textOpen PDF at page 2 ↗
  3. What they did

    • The researchers compared two rice genotypes: IR 74, which is sensitive to zinc deficiency, and RIL 46, which is tolerant. View evidence ↗

      What they did

      The researchers compared two rice genotypes: IR 74, which is sensitive to zinc deficiency, and RIL 46, which is tolerant.

      In the paper's own words

      “two contrasting Zn deficient efficient rice varieties, IR 74 (sensitive) and RIL 46 (tolerant) developed at IRRI, Philippines were grown.”

      Page 2

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 2 ↗
    • Plants were grown in both field and controlled phytotron environments, with groups receiving either zinc (+Zn) or no zinc (-Zn). View evidence ↗

      What they did

      Plants were grown in both field and controlled phytotron environments, with groups receiving either zinc (+Zn) or no zinc (-Zn).

      In the paper's own words

      “One set was grown in the field condition and other set was grown in phytotron facility (controlled environment). In both the conditions one set of plants were maintained with Zn and another set was without Zn”

      Page 2

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 2 ↗
  4. What they found

    • Zinc deficiency hindered root growth in both genotypes, but the sensitive IR 74 variety was more severely affected than RIL 46. View evidence ↗

      What they found

      Zinc deficiency hindered root growth in both genotypes, but the sensitive IR 74 variety was more severely affected than RIL 46.

      In the paper's own words

      “Conversely, in the absence of zinc, root growth was hindered in both genotypes. Nevertheless, IR 74 exhibited more constrained root growth compared to RIL 46.”

      Page 3

      Found in: Hydrogen peroxide accumulation in roots of sensitive and efficient genotypes

      Read it in the full textOpen PDF at page 3 ↗
    • The tolerant RIL 46 variety maintained higher zinc uptake under deficient conditions compared to IR 74. View evidence ↗

      What they found

      The tolerant RIL 46 variety maintained higher zinc uptake under deficient conditions compared to IR 74.

      In the paper's own words

      “RIL 46 demonstrated a higher zinc uptake even under zinc-deficient conditions, surpassing the susceptible variety IR 74.”

      Page 4

      Found in: Hydrogen peroxide accumulation in roots of sensitive and efficient genotypes

      Read it in the full textOpen PDF at page 4 ↗
    • The sensitive rice line accumulated more hydrogen peroxide in its roots under zinc deficiency, indicating a higher oxidative stress response. View evidence ↗

      What they found

      The sensitive rice line accumulated more hydrogen peroxide in its roots under zinc deficiency, indicating a higher oxidative stress response.

      In the paper's own words

      “The findings indicated that under zinc deficiency (-Zn), the sensitive line accumulated more hydrogen peroxide in its roots compared to the efficient line.”

      Page 5

      Found in: Hydrogen peroxide accumulation in roots of sensitive and efficient genotypes

      Read it in the full textOpen PDF at page 5 ↗
  5. What it means

    • The authors conclude that zinc accumulation in leaves/seeds, GR activity, and hydrogen peroxide levels are effective indicators for selecting zinc-resilient rice varieties. View evidence ↗

      What it means

      The authors conclude that zinc accumulation in leaves/seeds, GR activity, and hydrogen peroxide levels are effective indicators for selecting zinc-resilient rice varieties.

      In the paper's own words

      “the accumulation of zinc in leaves and seeds, along with Glutathione Reductase activity and hydrogen peroxide accumulation, can serve as valuable indicators for selecting rice lines that exhibit resilience and better adaptation to zinc deficit soil conditions.”

      Page 5

      Found in: Conclusion

      Read it in the full textOpen PDF at page 5 ↗

Visual summary

1 visuals

Illustrations explain the paper; they do not show study data.

AI-generated illustration
AI-generated conceptual illustration (rice plants (Oryza sativa)). It explains the idea and does not show study data.↗ Enlarge
Oxidative Stress Response Comparison
AI-generated conceptual illustration (rice plants (Oryza sativa)). It explains the idea and does not show study data.

AI-generated conceptual illustration (rice plants (Oryza sativa)). It explains the idea and does not show study data.

Open full-size image ↗

Oxidative Stress Response Comparison

AI-generated conceptual illustration (rice plants (Oryza sativa)). It explains the idea and does not show study data.

View source evidence ↗

Figures & tables

From the original paper
Plants grown in field and phytotronFigure 1Page 2Sowing of seeds in plastic trays maintained in phytotronFigure 2Page 2Sowing of seeds in plastic trays maintained in phytotronFigure 2Page 2Collection and soring of samples for biochemical analysisFigure 3Page 2Root growth of Zn efficient and sensitive lines with +Zn andFigure 4Page 2Difference in shoot and root growth of sensitive andFigure 5Page 2Root and shoot Zn concentration (%) in plants grown in presence and absence of Zn in the soilFigure 6Page 3Grain Zn content after harvest in +Zn and –Zn conditionFigure 7Page 3GR activity in efficient and sensitive lines under Zn sufficient and Zn deficit conditionFigure 8Page 4Hydrogen peroxide accumulation in efficient and sensitive linesFigure 9Page 4
FULL TEXT Original article · reflowed for reading

Introduction

Zinc (Zn) is an essential micronutrient for plants, plays a crucial role in various physiological and biochemical processes. Zinc is involved in a wide range of biological functions in plants and humans including serving as a cofactor for numerous enzymes, maintaining the structure of proteins and playing a role in gene expression (Costa et al., 2023 & Roohani et al., 2013) [4, 5] . The World Health Organization (WHO) estimates that around two billion people worldwide suffer from Zn deficiency. Zinc deficiency is indeed a significant global health issue, particularly in developing countries. One of the primary reasons for zinc deficiency in many populations is the consumption of diets that are low in zinc (Hussain et al., 2022) [6] , particularly in regions where people rely heavily on plant-based foods. And also due to inadequate Zn availability in soils which reduces yield and nutrient content in grains (Saleem et al., 2022) [7] . One of the best strategies is to focus on identifying and developing plant varieties that are efficient in taking up and utilizing zinc from the soil and produce Zn dense grains by selecting the parental lines with desirable traits through breeding programmes (Khan et al., 2022) [8] . Rice is a major staple food for a significant portion of the world's population, particularly in Asia where it serves as a primary source of calories. However, rice is known to be deficient in certain micronutrients, including zinc (Gindri et al., 2020) [9] . Identifying Zn efficient rice genotypes by understanding their physiological, biochemical and molecular mechanism is a best option combat the Zn deficiency both in plants and humans. The response of rice plants to zinc deficiency can vary based on genetic, physiological and biochemical factors. Among biochemical aspects, glutathione reductase plays a crucial role in enhancing plant tolerance to abiotic stresses. Similarly, plants overproduce reactive oxygen species like hydrogen peroxide (H 2 O 2 ) during abiotic stresses and hence, regulation of Glutathione Reductase and H 2 O 2 is vital for imparting stress tolerance in plants (Hasanuzzaman et al., 2017) [10] . An experiment was conducted in two contrasting rice genotypes to investigate their varied responses to zinc deficiency. The goal was to study the physiological and biochemical factors influencing these responses, providing valuable insights for the development of zinc-efficient rice varieties through breeding programs further to improve crop productivity and nutritional quality under zinc-limiting conditions.

Materials and Methods

For the experiment, two contrasting Zn deficient efficient rice varieties, IR 74 (sensitive) and RIL 46 (tolerant) developed at IRRI, Philippines were grown. One set was grown in the field condition and other set was grown in phytotron facility (controlled environment). In both the conditions one set of plants were maintained with Zn and another set was without Zn (Fig. 1). In the experiment, the "+Zn" plot received 15 kg per hectare of zinc in the form of ZnSO 4 •7H 2 O in addition to recommended dose of nitrogen, phosphorous and potassium, while the "-Zn" plot received no zinc. The seeds of rice varieties IR74 and RIL46 were sown in shallow seedling trays filled with untreated soil and after three weeks, the seedlings were transplanted as single-plant hills in microplots measuring 2.4 m 2 with randomized complete block design with three replications. Similarly, pre-germinated seeds were sown in plastic trays maintained at phytotron (Fig. 2). Trays were filled with culture solution which contained 0.35g ZnSO 4 .7H 2 O per 10 L of distilled water along with other required elements. For "-Zn", culture solution was prepared without ZnSO 4 .7H 2 O (Singh & Mishra, 2004) [3] , modified from Yoshida et al., 1976 [2] . Thirty days after transplanting, observations on physiological parameters were recorded. Root and shoot length were measured (data not shown). Plants were pulled from the soil and the nutrient solution without damaging roots for Zn estimation, glutathione reductase activity and Hydrogen peroxide accumulation. After harvest Zn content in seeds were estimated in IR 74 and RIL 46 at "+Zn" and "-Zn" condition. Samples were collected for Zn estimation, enzyme (glutathione reductase) analysis and root staining for hydrogen peroxide accumulation both in Zn efficient and sensitive lines and the data presented in the paper are from the plants grown in the field condition. The samples were washed with Nanopure quality water, wrapped in aluminium foils and were snap-frozen in liquid nitrogen (Fig. 3). The collected samples were stored at -80 °C refrigerator until measurements were done. Zinc estimation in root, shoot and grains Finely powdered sample of root, leaves and grains (500 mg) were taken into polyethylene tubes, to which 25 ml 1N HCL solution was added and homogenized once the solution along with the powder. The sample was left over night for 24 hrs, without shaking by allowing it to digest in acid. The following day, once again the solution was mixed by shaking before filtering. The extract was collected in clean (acid washed) polyethylene tube. Observations of the sample extract were recorded using Atomic Absorption Spectrophotometer.

Figure 3. Collection and soring of samples for biochemical analysis
Collection and soring of samples for biochemical analysis↗ Enlarge
Figure 3
Collection and soring of samples for biochemical analysis

Collection and soring of samples for biochemical analysis

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Original paper figureSource PDF · page 2 ↗
Figure 2. Sowing of seeds in plastic trays maintained in phytotron
Sowing of seeds in plastic trays maintained in phytotron↗ Enlarge
Figure 2
Sowing of seeds in plastic trays maintained in phytotron

Sowing of seeds in plastic trays maintained in phytotron

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Original paper figureSource PDF · page 2 ↗
Figure 2. Sowing of seeds in plastic trays maintained in phytotron
Sowing of seeds in plastic trays maintained in phytotron↗ Enlarge
Figure 2
Sowing of seeds in plastic trays maintained in phytotron

Sowing of seeds in plastic trays maintained in phytotron

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Original paper figureSource PDF · page 2 ↗
Figure 1. Plants grown in field and phytotron
Plants grown in field and phytotron↗ Enlarge
Figure 1
Plants grown in field and phytotron

Plants grown in field and phytotron

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Original paper figureSource PDF · page 2 ↗

Estimation of glutathione reductase activity

The assessment of glutathione reductase (GR) enzyme activity, as well as protein and GR content, was conducted following the protocol outlined by Halliwell and Foyer in 1978.

Hydrogen peroxide accumulation in roots of sensitive and efficient genotypes

The roots of both Zn-sensitive and Zn-efficient lines were subjected to staining with CM-H2DCFDA (Chao et al., 2008) [11] and subsequently observed for the accumulation of hydrogen peroxide (H 2 O 2 ) using a fluorescence microscope with excitation at 488nm and emission in the range of 510-560nm, with a bandpass filter set at 510-530nm. The zinc content analysis in leaves conducted 30 days after transplanting revealed that while IR 74 exhibited a notable capacity to absorb and translocate more zinc under normal zinc conditions ("+Zn"), its ability to uptake and translocate zinc was compromised in the absence of zinc (Fig 6). In contrast, RIL 46 demonstrated a higher zinc uptake even under zinc-deficient conditions, surpassing the susceptible variety IR 74. This highlights RIL 46's enhanced resilience to zinc deficit conditions compared to IR 74. Zn content analysis in grains post-harvest revealed distinct patterns (Fig 7). Under normal Zn conditions ("+Zn"), RIL accumulated 0.0235% zinc, outperforming IR 74, which accumulated 0.0195% Zn. In the absence of Zn, IR 74 showed a significant decrease in zinc accumulation, reaching only 0.013% zinc. In contrast, the efficient line, RIL 46, maintained a higher Zn content even under zinc stress conditions, recording 0.0204% zinc. This underscores the resilience of the efficient line to zinc stress, as evidenced by its sustained zinc accumulation compared to the susceptible variety IR 74. In the context of this study, the investigation into Glutathione Reductase (GR) enzyme activity in leaves revealed that under normal conditions, both the sensitive and efficient lines exhibited comparable GR enzyme activity levels (Fig 8). However, when subjected to zinc deficit conditions, a noteworthy divergence in GR activity became apparent. The efficient line displayed significantly lower GR activity compared to the sensitive line. This observed reduction in GR activity in the efficient line under zinc deficit conditions can be attributed to a strategic response to mitigate oxidative damage. Despite the zinc deficiency stress, the efficient line demonstrated less oxidative damage, as evidenced by the lower GR activity.

Figure 8. GR activity in efficient and sensitive lines under Zn sufficient and Zn deficit condition
GR activity in efficient and sensitive lines under Zn sufficient and Zn deficit condition↗ Enlarge
Figure 8
GR activity in efficient and sensitive lines under Zn sufficient and Zn deficit condition

GR activity in efficient and sensitive lines under Zn sufficient and Zn deficit condition

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Original paper figureSource PDF · page 4 ↗
Figure 7. Grain Zn content after harvest in +Zn and –Zn condition
Grain Zn content after harvest in +Zn and –Zn condition↗ Enlarge
Figure 7
Grain Zn content after harvest in +Zn and –Zn condition

Grain Zn content after harvest in +Zn and –Zn condition

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Original paper figureSource PDF · page 3 ↗
Figure 6. Root and shoot Zn concentration (%) in plants grown in presence and absence of Zn in the soil
Root and shoot Zn concentration (%) in plants grown in presence and absence of Zn in the soil↗ Enlarge
Figure 6
Root and shoot Zn concentration (%) in plants grown in presence and absence of Zn in the soil

Root and shoot Zn concentration (%) in plants grown in presence and absence of Zn in the soil

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Original paper figureSource PDF · page 3 ↗

Results and Discussion

This suggests that the efficient line has developed mechanisms to cope with zinc deficit-induced oxidative stress more efficiently. Conversely, the sensitive line exhibited higher GR activity under zinc deficit conditions. This heightened enzymatic activity can be interpreted as a reactive response to counteract increased oxidative damage experienced by the sensitive line in the absence of sufficient zinc. The elevated GR activity in the sensitive line signifies an attempt to mitigate the oxidative stress and underscores the susceptibility of this line to the adverse effects of zinc deficiency.

Conclusion

The study suggests that the accumulation of zinc in leaves and seeds, along with Glutathione Reductase activity and hydrogen peroxide accumulation, can serve as valuable indicators for selecting rice lines that exhibit resilience and better adaptation to zinc deficit soil conditions. These parameters provide insights into the plant's ability to cope with nutrient stress, aiding in the identification and cultivation of varieties that can thrive under zinc-deficient environments.

Figures and tables from the paper

Figure 4. Root growth of Zn efficient and sensitive lines with +Zn and
Root growth of Zn efficient and sensitive lines with +Zn and↗ Enlarge
Figure 4
Root growth of Zn efficient and sensitive lines with +Zn and

Root growth of Zn efficient and sensitive lines with +Zn and

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Original paper figureSource PDF · page 2 ↗
Figure 5. Difference in shoot and root growth of sensitive and
Difference in shoot and root growth of sensitive and↗ Enlarge
Figure 5
Difference in shoot and root growth of sensitive and

Difference in shoot and root growth of sensitive and

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Original paper figureSource PDF · page 2 ↗
Figure 9. Hydrogen peroxide accumulation in efficient and sensitive lines
Hydrogen peroxide accumulation in efficient and sensitive lines↗ Enlarge
Figure 9
Hydrogen peroxide accumulation in efficient and sensitive lines

Hydrogen peroxide accumulation in efficient and sensitive lines

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Original paper figureSource PDF · page 4 ↗

References

9 in the original paper
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  9. Chao YE, Zhang M, Tian SK, Lu LL, Yang XE. Differential generation of hydrogen peroxide upon exposure to zinc and cadmium in the hyperaccumulating plant species (Sedum alfredii Hance). 2008. J Zhejiang Univ Sci B. 9(3):243-249.