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Research article · 2022 · Full text

International Journal of Agriculture and Food Science

Phenotypic correlation between morphological and yield related traits of rice (Oryza sativa L.)

G Babithraj GoudD Saida NaikR Abdul FiyazMM AzamS. Narender ReddyB Balaji Naik

Volume 4(2) · Pages 150–154 · DOI: 10.33545/2664844x.2022.v4.i2b.115 ↗

Research areasGenetics and Plant BreedingRice Cultivation and Yield ImprovementGenetic Mapping and Diversity in Plants and Animals

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Abstract

Author-written

Rice is known as major staple food crop in India by providing food to more than 70 per cent population. An experiment was carried out in Alpha lattice design with two replications at ICAR-Indian Institute of Rice Research (ICAR-IIRR). An experiment was conducted during kharif season of year 2019 to study correlation and path coefficient analysis in 152 rice germplasm lines were collected. Analysis of variance showed significant differences among genotypes for all the 10 traits studied. Correlation studies revealed that grain yield per plant had positive and significant association plant height at both genotypic and phenotypic levels. Hence, these characters should be given due consideration while applying selection for increasing yield. Results of path analysis indicated that the maximum direct effects for plant height, tiller number per plant, no. of un filled grains per panicle, panicle weight as well as appreciable indirect effects were exerted by days to 50% flowering, effective number of tillers, test weight, towards grain yield per plant. Therefore, selection pressure imposed on these traits would bring improvement in grain yield of rice.

Summary

Source-checked

Plain-language reading of the full paper, prepared with AI and checked against the text. Each point links to the authors' own words.

  1. Why it matters

    • Rice is a critical staple food crop globally, with an annual production of 759.6 million tonnes, and it supports over 70% of the population in India. View evidence ↗

      Why it matters

      Rice is a critical staple food crop globally, with an annual production of 759.6 million tonnes, and it supports over 70% of the population in India.

      In the paper's own words

      “Rice (Oryza sativa L.) is one of the important staple food crops with an annual production of 759.6 million tonnes (FAOSTAT, 2018) [12]. Rice feeds more than 70 per cent population in India and contributes especially towards the global food security.”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • Because rice yield is a complex trait influenced by various direct and indirect components, understanding the association between morphological traits and yield is necessary for improvement. View evidence ↗

      Why it matters

      Because rice yield is a complex trait influenced by various direct and indirect components, understanding the association between morphological traits and yield is necessary for improvement.

      In the paper's own words

      “Yield, being a complex trait, is composed of several components some of which affect the yield directly, while other affect indirectly. Hence, knowledge of association between Morphological, yield and its components is necessary.”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
    • Selecting plants based on specific component characters is often more effective for increasing yield than selecting based on seed yield alone. View evidence ↗

      Why it matters

      Selecting plants based on specific component characters is often more effective for increasing yield than selecting based on seed yield alone.

      In the paper's own words

      “Selection directly based on the performance of seed yield, may not be very effective but selection based on its component characters would prove more effective as reported in other plants (Fisher, 1918).”

      Page 1

      Found in: Introduction

      Read it in the full textOpen PDF at page 1 ↗
  2. The question

    • The study aimed to analyze the correlation and path coefficients of 152 rice germplasm lines during the 2019 kharif season. View evidence ↗

      The question

      The study aimed to analyze the correlation and path coefficients of 152 rice germplasm lines during the 2019 kharif season.

      In the paper's own words

      “An experiment was conducted during kharif season of year 2019 to study correlation and path coefficient analysis in 152 rice germplasm lines were collected.”

      Page 1

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 1 ↗
  3. What they did

    • The researchers evaluated 152 rice germplasm lines from India and the Philippines using an Alpha lattice design with two replications at the ICAR-IIRR in Hyderabad. View evidence ↗

      What they did

      The researchers evaluated 152 rice germplasm lines from India and the Philippines using an Alpha lattice design with two replications at the ICAR-IIRR in Hyderabad.

      In the paper's own words

      “An experiment was carried out in Alpha lattice design with two replications at ICAR-Indian Institute of Rice Research (ICAR-IIRR).”

      Page 1

      “One hundred and fifty two (152) rice germplasm lines collected from all over India and Philippines were evaluated for yield and component traits during Kharif 2019 in Alpha lattice design with two replications at ICAR-Indian Institute of Rice Research (ICAR-IIRR), Rajendranagar, Hyderabad.”

      Page 1

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 1 ↗
    • Ten traits were measured from five randomly selected competitive plants per replication, including plant height, tiller numbers, grain counts, panicle weight/length, test weight, and yield per plant. View evidence ↗

      What they did

      Ten traits were measured from five randomly selected competitive plants per replication, including plant height, tiller numbers, grain counts, panicle weight/length, test weight, and yield per plant.

      In the paper's own words

      “Replication-wise data on the basis of five randomly taken competitive plants were recorded on following traits: viz., days to fifty per cent flowering (DFF), Total number of tillers per plant (TNT), effective number of tillers (ENT), plant height (PH) (cm), number of filled grains (NFG), number of un filled grains (NUFG), panicle weight (PW) (g), panicle weight (PL) (cm), test weight (TW) (g), and yield per plant (YPP) (g).”

      Page 2

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 2 ↗
    • Statistical analysis was performed using SAS software, with ANOVA based on the Cochran and Cox model for Alpha lattice designs. View evidence ↗

      What they did

      Statistical analysis was performed using SAS software, with ANOVA based on the Cochran and Cox model for Alpha lattice designs.

      In the paper's own words

      “The mean of five plants for each metric trait was considered for statistical analysis using SAS software. The analysis of variance (ANOVA) was done on the basis of model described by Cochran and Cox (1950) [10] for Alpha lattice design.”

      Page 2

      Found in: Materials and Methods

      Read it in the full textOpen PDF at page 2 ↗
  4. What they found

    • Analysis of variance revealed that there were significant differences among the genotypes for all ten traits studied. View evidence ↗

      What they found

      Analysis of variance revealed that there were significant differences among the genotypes for all ten traits studied.

      In the paper's own words

      “Analysis of variance showed significant differences among genotypes for all the 10 traits studied.”

      Page 1

      Found in: Path coefficient analysis

      Read it in the full textOpen PDF at page 1 ↗
    • At the phenotypic level in 2019, plant height had a positive direct effect of 0.022 on single plant yield. View evidence ↗

      What they found

      At the phenotypic level in 2019, plant height had a positive direct effect of 0.022 on single plant yield.

      In the paper's own words

      “Plant height had positive and direct effect (0.022) on single plant yield at phenotypic levels in 2019.”

      Page 2

      Found in: Total no. of Tillers

      Read it in the full textOpen PDF at page 2 ↗
    • The total number of tillers showed a positive direct effect of 0.045 on single plant yield at the phenotypic level in 2019. View evidence ↗

      What they found

      The total number of tillers showed a positive direct effect of 0.045 on single plant yield at the phenotypic level in 2019.

      In the paper's own words

      “Total no. of Tillers had positive and direct effect (0.045) on single plant yield at phenotypic levels in 2019.”

      Page 2

      Found in: Total no. of Tillers

      Read it in the full textOpen PDF at page 2 ↗
    • The number of unfilled grains showed a positive direct effect of 0.146 on single plant yield at the phenotypic level in 2019. View evidence ↗

      What they found

      The number of unfilled grains showed a positive direct effect of 0.146 on single plant yield at the phenotypic level in 2019.

      In the paper's own words

      “Number of unfilled grains had positive and direct effect (0.146) on single plant yield at phenotypic levels in 2019.”

      Page 3

      Found in: Total no. of Tillers

      Read it in the full textOpen PDF at page 3 ↗
    • Panicle weight had a positive direct effect of 0.155 on single plant yield at the phenotypic level in 2019. View evidence ↗

      What they found

      Panicle weight had a positive direct effect of 0.155 on single plant yield at the phenotypic level in 2019.

      In the paper's own words

      “Panicle weight had positive and direct effect (0.155) on single plant yield at phenotypic levels in 2019.”

      Page 3

      Found in: Panicle weight

      Read it in the full textOpen PDF at page 3 ↗
    • Panicle length had a positive direct effect of 0.046 on single plant yield at the phenotypic level in 2020. View evidence ↗

      What they found

      Panicle length had a positive direct effect of 0.046 on single plant yield at the phenotypic level in 2020.

      In the paper's own words

      “Panicle length had positive and direct effect (0.046) on single plant yield at phenotypic levels in 2020.”

      Page 3

      Found in: Panicle length

      Read it in the full textOpen PDF at page 3 ↗
    • Thousand test weight had a negative direct effect of -0.145 on single plant yield at the phenotypic level in 2019. View evidence ↗

      What they found

      Thousand test weight had a negative direct effect of -0.145 on single plant yield at the phenotypic level in 2019.

      In the paper's own words

      “Thousand test weight had negative and direct effect (-0.145) on single plant yield at phenotypic levels in 2019.”

      Page 3

      Found in: Total no. of Tillers

      Read it in the full textOpen PDF at page 3 ↗
  5. What it means

    • The authors conclude that plant height, tiller number, unfilled grains per panicle, and panicle weight have high direct effects on grain yield, while days to flowering, effective tillers, and test weight exert appreciable indirect effects. View evidence ↗

      What it means

      The authors conclude that plant height, tiller number, unfilled grains per panicle, and panicle weight have high direct effects on grain yield, while days to flowering, effective tillers, and test weight exert appreciable indirect effects.

      In the paper's own words

      “Thus, it concludes that path analysis based on phenotypic correlation showed high direct effect of plant height, tiller number per plant, no. of un filled grains per panicle, panicle weight as well as appreciable indirect effects were exerted by days to 50% flowering, effective number of tillers, test weight, towards grain yield per plant.”

      Page 4

      Found in: Conclusion

      Read it in the full textOpen PDF at page 4 ↗
    • The authors recommend using these specific morphological and yield-related characters to apply selection pressure for improving rice yield. View evidence ↗

      What it means

      The authors recommend using these specific morphological and yield-related characters to apply selection pressure for improving rice yield.

      In the paper's own words

      “Revealing scope for considering these characters for imposing selection pressure for bringing out an improvement in rice yield.”

      Page 4

      Found in: Conclusion

      Read it in the full textOpen PDF at page 4 ↗

Visual summary

2 visuals

Illustrations explain the paper; charts are replotted from the paper's own table values.

AI-generated illustration
AI-generated conceptual illustration (Rice plants (Oryza sativa L.)). It explains the idea and does not show study data.↗ Enlarge
Direct vs Indirect Effects on Rice Yield
AI-generated conceptual illustration (Rice plants (Oryza sativa L.)). It explains the idea and does not show study data.

AI-generated conceptual illustration (Rice plants (Oryza sativa L.)). It explains the idea and does not show study data.

Open full-size image ↗

Direct vs Indirect Effects on Rice Yield

AI-generated conceptual illustration (Rice plants (Oryza sativa L.)). It explains the idea and does not show study data.

View source evidence ↗
Replotted from source data
Replotted from Table 1 (page 3) of the original paper. Every bar is the paper's own table value.↗ Enlarge
YPP: DFF vs PH vs TNT vs ENT vs NFG
Replotted from Table 1 (page 3) of the original paper. Every bar is the paper's own table value.

Replotted from Table 1 (page 3) of the original paper. Every bar is the paper's own table value.

Open full-size image ↗

YPP: DFF vs PH vs TNT vs ENT vs NFG

Replotted from Table 1 (page 3) of the original paper. Every bar is the paper's own table value.

View source evidence ↗

Figures & tables

From the original paper
Direct Indirect Effect Phenotypically between Morphological and yield traits in 2019Table 1Page 3
FULL TEXT Original article · reflowed for reading

Introduction

Rice (Oryza sativa L.) is one of the important staple food crops with an annual production of 759.6 million tonnes (FAOSTAT, 2018) [12] . Rice feeds more than 70 per cent population in India and contributes especially towards the global food security. However, rapidly increasing population has forced us to look for another quantum jump in rice production. Yield, being a complex trait, is composed of several components some of which affect the yield directly, while other affect indirectly. Hence, knowledge of association between Morphological, yield and its components is necessary. Selection directly based on the performance of seed yield, may not be very effective but selection based on its component characters would prove more effective as reported in other plants (Fisher, 1918). Correlation studies would provide estimates of degree of association between seed yield, its various components and also among the components. Although studies on correlation are helpful in determining the components of complex characters like seed yield, these estimates do not provide an exact information about the relative magnitude of direct and indirect influences of each of the component character on seed yield. In this context Wright (1921) [31] proposed estimation of path coefficient analysis as an important tool in partitioning the correlation coefficient into two parts, direct and indirect effects which will be useful in identifying biometrical characters to achieve desirable goal. Therefore, path-coefficient analysis is important to elucidate the intrinsic nature of association of component traits by determining the direct or indirect contribution of these traits to yield.

Materials and Methods

One hundred and fifty two (152) rice germplasm lines collected from all over India and Philippines were evaluated for yield and component traits during Kharif 2019 in Alpha lattice design with two replications at ICAR-Indian Institute of Rice Research (ICAR-IIRR), Rajendranagar, Hyderabad. Thirty days old seedlings were transplanted by adopting a spacing of 15 cm between plants and 20 cm between rows. Recommended agronomic and plant protection measures for raising a healthy nursery and main crop were taken up during the experiment. Replication-wise data on the basis of five randomly taken competitive plants were recorded on following traits: viz., days to fifty per cent flowering (DFF), Total number of tillers per plant (TNT), effective number of tillers (ENT), plant height (PH) (cm), number of filled grains (NFG), number of un filled grains (NUFG), panicle weight (PW) (g), panicle weight (PL) (cm), test weight (TW) (g), and yield per plant (YPP) (g). The mean of five plants for each metric trait was considered for statistical analysis using SAS software. The analysis of variance (ANOVA) was done on the basis of model described by Cochran and Cox (1950) [10] for Alpha lattice design. The genotypic and phenotype variances were calculated as per the formulae proposed by Burton and Devane, 1953 [7] . The replicated data were subjected to statistical analysis. The estimates of covariances were worked out as per Singh and Choudhary (1985) [28] . The estimates of covariances and variances were utilized in computing genotypic and phenotypic path coefficient was worked out as suggested by Wright (1921) [31] .

Path coefficient analysis

The genetic architecture of grain yield is based on the overall net effect produced by various yield components interacting with one another. The association of different component characters among themselves and with yield is quite important for devising an efficient selection criterion for yield. Correlation gives only the relation between two variables, whereas path coefficient analysis allows separation of the direct effect and their indirect effects through other attributes by partitioning the correlations (Wright, 1921) [31] . Based on the data recorded on the genotypes in the present investigation, the phenotypic correlations coefficients were estimated to determine direct and indirect effects of yield and contributing characters. The results for phenotypic path coefficient analysis for yield and its component traits are presented in table.1 For the improvement of crop for higher yield prior to any breeding program, it is commandment to obtain information regarding the inter-relationship of different characters with yield and among themselves, since it facilitates the quicker assessment of high yielding and better performing genotypes in selection programmed. The phenotypic correlation coefficients were estimated among 10 traits of 152 rice germplasm, to find out the association of grain yield and other yield contributing characters (Table 1). [14] reported days to 50% flowering showed direct negative effect. [9] revealed the positive direct effect of plant height, on grain yield. Pankaj et al. (2010) [20] revealed the direct positive effect of plant height at maturity on yield per plant at genotypic level. Ambili and Radhakrishnan (2011) [3] reported high positive direct effect of plant height on grain yield, followed by total no. of tillers, number of productive tillers per plant, Panicle length, panicle weight, no. of filled grains, test weight. The high negative direct effect on yield was recorded for days to flowering. They concluded that yield of rice can be improved by selecting medium tall genotypes having more number of productive tillers per plant, higher straw yield and an optimum duration.

Table 1. Direct Indirect Effect Phenotypically between Morphological and yield traits in 2019
—DFFPHTNTENTNFGNUFGPWPLTGWYPP
DFF-0.0670.003417-0.005829-0.0061640-0.005427-0.014941-0.0049580.004556-0.004422
PH-0.0011220.022-0.000836-0.0011660.004730.0016940.0047740.002970.000858-0.000836
TNT0.003915-0.001710.0450.041580.003420.00252-0.004815-0.00882-0.005310.004995
ENT-0.0098440.005671-0.098868-0.107-0.01177-0.0055640.0086670.0163710.01284-0.013161
NFG0-0.03483-0.012312-0.01782-0.162-0.054594-0.07695-0.0126360.020898-0.015714
NUFG0.0118260.0112420.0081760.0075920.0492020.1460.0283240.01241-0.0154760.013432
PW0.0345650.033635-0.016585-0.0125550.0736250.030070.1550.0252650.00620.01395
PL0000000000
TGW0.00986-0.0056550.017110.01740.0187050.01537-0.0058-0.00232-0.145-0.00087
YPP-0.00330.0019-0.00555-0.00615-0.00485-0.0046-0.0045-0.00425-0.0003-0.05

Table text extracted from the original PDF; superscript letters are shown inline. The original table image is below.

View original table image
Direct Indirect Effect Phenotypically between Morphological and yield traits in 2019↗ Enlarge
Table 1
Direct Indirect Effect Phenotypically between Morphological and yield traits in 2019

Direct Indirect Effect Phenotypically between Morphological and yield traits in 2019

Open full-size image ↗
Original paper tableSource PDF · page 3 ↗

Results and Discussion

Results and Discussion

Plant height

Plant height

Total no. of Tillers

Total no. of Tillers had positive and direct effect (0.045) on single plant yield at phenotypic levels in 2019. It had indirect negative effects on single plant yield through plant height (-0.00171) panicle weight (-0.004815), panicle length (-0.00882), test weight (-0.00531). It had indirect positive effects on single plant yield through, Days to 50% flowering (0.003915), productive tiller number (0.04158), total no. of filled grains (0.00342), no. of un filled grains (0.00252), yield per plant (0.004995). Saravanan and Sabesan (2009) [26] revealed the estimates of direct effects for the number of tillers per plant with high direct effect on grain yield per plant, suggesting that the improvement in grain yield will be efficient if the selection is based on these component traits. Pankaj et al. (2010) [20] revealed the direct positive effect of tillers per plant on yield per plant. Ravindra Babu et al. (2012) [25] reported that number of tillers per hill exhibited maximum direct effect on grain yield per hill at phenotypic levels. Aditya and Anuradha (2013) [1] revealed that tillers per plant exhibited positive direct effect on grain yield.

Effective no. of tillers

Productive no. of tillers had negative and direct effect (-0.107) on single plant yield at phenotypic levels in 2019. It had indirect negative effects on single plant yield through Days to 50% flowering, (-0.009844), productive tiller number (-0.098868), no. of un filled grains (-0.01177), yield per plant (-0.013161). It had indirect positive effects on single plant yield through, plant height (0.005671), panicle weight (0.008667), panicle length (0.016371), test weight (0.01284). Khan et al. (2009) [18] reported negative direct effect of number of productive tillers per plant on grain yield. Sarawagi et al. (2016) [27] reported that effective tillers per plant showed positive direct effect on grain yield per plant. [4] , and Nithya et al. (2020) [35] . [21] .

Number of filled grains

Number of filled grains

Number of unfilled grains

Number of unfilled grains

Panicle weight

Panicle weight had positive and direct effect (0.155) on single plant yield at phenotypic levels in 2019. It had indirect negative effects on single plant yield through, total no. of tillers (-0.016585) productive tiller number (-0.012555). It had indirect positive effects on single plant yield through, Days to 50% flowering, (0.034565) plant height (0.033635), total no. of filled grains (0.073625), no. of un filled grains (0.03007), panicle length (0.025265), test weight (0.0062), yield per plant (0.01395).

Panicle length

Panicle length had positive and direct effect (0.046) on single plant yield at phenotypic levels in 2020. It had indirect negative effects on single plant yield through, total no. of tillers (-0.005382) productive tiller number (-0.00736), test weight (-0.000046). It had indirect positive effects on single plant yield through, Days to 50% flowering (0.00506), plant height (0.002576), total no. of filled grains (0.006486), no. of un filled grains (0.005152), yield per plant (0.002208), panicle weight (0.007498),

Awaneet and Senapati (2013) [6] revealed that panicle length exhibited positive direct effect on grain yield, while 1000 grain weight exhibited negative direct effect on grain yield. Chouhan et al. (2014) evaluated thirty five rice accessions to assess their character association and path analysis for grain yield and yield attributing traits. Path analysis revealed positive direct effects of traits panicle length on yield per plant. Dhurai et al. (2016) [11] revealed that panicle length exhibited high positive direct effects on grain yield. Harsha et al. (2017) [15] revealed that at phenotypic level panicle length direct positive effect. [9] revealed the positive direct effect of 1000-grain weight on grain yield. Harsha et al. (2017) [15] revealed that at phenotypic level, test weight showed direct positive effect.

Thousand test weight

Thousand test weight

Yield per plant

Yield per plant had negative and direct effect (-0.05) on single plant yield at phenotypic levels in 2019. It had indirect negative effects on single plant yield through, Days to 50% flowering, (-0.0033) panicle weight (-0.0045), panicle length (-0.00425), test weight (-0.0003). total no. of tillers (0.00555), productive tiller number (-0.00615), total no. of filled grains (-0.00485), no. of un filled grains (-0.0046), yield per plant (-0.05). It had indirect positive effects on single plant yield through, plant height (0.0019). The data showed that correlation at genotypic and phenotypic levels had the same trend. The values of genotypic correlation coefficients were higher than those of their respective phenotypic correlation coefficients in most of the cases, suggesting that there was a strong and inherent association between two characters. In some cases, however, the phenotypic correlation was slightly higher than their genotypic counterpart, which implied that the non-genetic causes inflated the value of genotypic correlation because of the influence of environmental factors.

Conclusion

Thus, it concludes that path analysis based on phenotypic correlation showed high direct effect of plant height, tiller number per plant, no. of un filled grains per panicle, panicle weight as well as appreciable indirect effects were exerted by days to 50% flowering, effective number of tillers, test weight, towards grain yield per plant. Revealing scope for considering these characters for imposing selection pressure for bringing out an improvement in rice yield. On the basis of all the above findings, it can be concluded that, while imposing selection for genetic improvement of grain yield in rice.

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