article Open AccessTop 1% cited
Cytoscape 2.8: new features for data integration and network visualization
Bioinformatics · 2010 · Vol. 27(3) · pp. 431–432
Michael Smoot✉(University of California, San Diego)Keiichiro Ono(University of California, San Diego)Johannes Ruscheinski(University of California, San Diego)Pengliang Wang(University of California, San Diego)Trey Ideker(University of California, San Diego)
Abstract
Cytoscape is a desktop Java application released under the Library Gnu Public License (LGPL). Binary install bundles and source code for Cytoscape 2.8 are available for download from http://cytoscape.org.
Bioinformatics and Genomic NetworksGenetics, Bioinformatics, and Biomedical ResearchGene expression and cancer classificationComputer scienceVisualizationMIT LicenseGraphicsNode (physics)JavaData miningData visualizationSoftwareGraph drawing
MeSH terms
SoftwareStatistics as TopicComputational Biology
Funding
- National Institutes of Health
Citations
4,992
FWCI
115.22
field-weighted impact
References
4
Percentile
100%
vs. same field & year
Citations per year
Cited by
Molecular Networking as a Dereplication Strategy
Journal of Natural Products · 2013 · 577 citations
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Bioinformatics · 2012 · 20,501 citations
iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections
PLoS Computational Biology · 2014 · 978 citations
Integrated analysis of lncRNA-miRNA-mRNA ceRNA network in squamous cell carcinoma of tongue
BMC Cancer · 2019 · 364 citations
A Chaperome Subnetwork Safeguards Proteostasis in Aging and Neurodegenerative Disease
Cell Reports · 2014 · 593 citations
Gut Microbiota and Extreme Longevity
Current Biology · 2016 · 977 citations
Microbial interactions: from networks to models
Nature Reviews Microbiology · 2012 · 3,912 citations
References
Integration of biological networks and gene expression data using Cytoscape
Nature Protocols · 2007 · 2,566 citations
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Genome Research · 2003 · 53,132 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
