article Open AccessTop 1% cited
A comparison of normalization methods for high densityoligonucleotide array data based on variance and bias
Bioinformatics · 2003 · Vol. 19(2) · pp. 185–193
Benjamin M. Bolstad✉(University of California, Berkeley)Rafael A. Irizarry(Johns Hopkins University)Magnus Åstrand(AstraZeneca (Sweden))Terence P. Speed(University of California, Berkeley)
Abstract
Additional figures may be found at http://www.stat.berkeley.edu/~bolstad/normalize/index.html
Gene expression and cancer classificationMolecular Biology Techniques and ApplicationsSingle-cell and spatial transcriptomicsBioconductorNormalization (sociology)Computer scienceR packageData miningSoftwareAlgorithmLinear scaleStatisticsPattern recognition (psychology)
MeSH terms
AlgorithmsCalibrationModels, GeneticQuality ControlStochastic ProcessesMolecular ProbesSequence Analysis, DNANonlinear DynamicsOligonucleotide Array Sequence Analysis
Citations
8,399
FWCI
75.97
field-weighted impact
References
11
Percentile
100%
vs. same field & year
Citations per year
Cited by
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
Bioinformatics · 2014 · 4,743 citations
Gene Expression Profiling in Breast Cancer: Understanding the Molecular Basis of Histologic Grade To Improve Prognosis
JNCI Journal of the National Cancer Institute · 2006 · 2,125 citations
PHO2, MicroRNA399, and PHR1 Define a Phosphate-Signaling Pathway in Plants
PLANT PHYSIOLOGY · 2006 · 1,133 citations
Normalization Approaches for Removing Systematic Biases Associated with Mass Spectrometry and Label-Free Proteomics
Journal of Proteome Research · 2006 · 500 citations
Exaggerated neuroinflammation and sickness behavior in aged mice after activation of the peripheral innate immune system
The FASEB Journal · 2005 · 808 citations
Large oncosomes contain distinct protein cargo and represent a separate functional class of tumor-derived extracellular vesicles
Oncotarget · 2015 · 387 citations
Normalization of Real-Time Quantitative Reverse Transcription-PCR Data: A Model-Based Variance Estimation Approach to Identify Genes Suited for Normalization, Applied to Bladder and Colon Cancer Data Sets
Cancer Research · 2004 · 7,130 citations
voom: precision weights unlock linear model analysis tools for RNA-seq read counts
Genome biology · 2014 · 6,605 citations
References
Locally Weighted Regression: An Approach to Regression Analysis by Local Fitting
Journal of the American Statistical Association · 1988 · 5,429 citations
Modern Applied Statistics with S-Plus.
Biometrics · 1996 · 3,033 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
