articleTop 1% cited
Fast and sensitive protein alignment using DIAMOND
Nature Methods · 2014 · Vol. 12(1) · pp. 59–60
Benjamin Buchfink✉(University of Tübingen)Chao Xie(Singapore Centre for Environmental Life Sciences Engineering)Daniel H. Huson(Nanyang Technological University)
Genomics and Phylogenetic StudiesBioinformatics and Genomic NetworksMachine Learning in BioinformaticsBottleneckMetagenomicsComputer scienceDiamondSensitivity (control systems)SoftwareSearch engine indexingSpeedupComputational biologyData mining
MeSH terms
AlgorithmsBase SequenceHumansSensitivity and SpecificitySoftwareSequence AlignmentSequence Analysis, DNAMetagenomicsMicrobiota
Citations
14,618
FWCI
59.22
field-weighted impact
References
24
Percentile
100%
vs. same field & year
Citations per year
Cited by
Long-term nutrient inputs shift soil microbial functional profiles of phosphorus cycling in diverse agroecosystems
The ISME Journal · 2019 · 706 citations
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
Molecular Biology and Evolution · 2017 · 2,948 citations
HH-suite3 for fast remote homology detection and deep protein annotation
BMC Bioinformatics · 2019 · 1,244 citations
Fast and sensitive taxonomic classification for metagenomics with Kaiju
Nature Communications · 2016 · 2,200 citations
OrthoFinder: phylogenetic orthology inference for comparative genomics
Genome biology · 2019 · 7,564 citations
MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
Nature Biotechnology · 2017 · 4,806 citations
Species-level functional profiling of metagenomes and metatranscriptomes
Nature Methods · 2018 · 1,723 citations
Producing polished prokaryotic pangenomes with the Panaroo pipeline
Genome biology · 2020 · 1,203 citations
References
Basic local alignment search tool
Journal of Molecular Biology · 1990 · 93,570 citations
Identification of common molecular subsequences
Journal of Molecular Biology · 1981 · 10,021 citations
Database resources of the National Center for Biotechnology Information: update
Nucleic Acids Research · 2003 · 11,003 citations
Search and clustering orders of magnitude faster than BLAST
Bioinformatics · 2010 · 21,473 citations
<tt>BLAT</tt>—The <tt>BLAST</tt>-Like Alignment Tool
Genome Research · 2002 · 8,404 citations
KEGG: Kyoto Encyclopedia of Genes and Genomes
Nucleic Acids Research · 1999 · 32,330 citations
KEGG: Kyoto Encyclopedia of Genes and Genomes
Nucleic Acids Research · 2000 · 38,352 citations
Citation Network
How this paper connects to the literature. Drag to explore, click any node to open that paper.
