Scinovex
article Open AccessTop 1% cited

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

BMC Bioinformatics · 2010 · Vol. 11(1) · pp. 395–395
Tomáš PluskalSandra CastilloAlejandro Villar‐BrionesMatej Orešič

Abstract

MZmine 2 is freely available under a GNU GPL license and can be obtained from the project website at: http://mzmine.sourceforge.net/. The current version of MZmine 2 is suitable for processing large batches of data and has been applied to both targeted and non-targeted metabolomic analyses.

Metabolomics and Mass Spectrometry StudiesAdvanced Proteomics Techniques and ApplicationsMass Spectrometry Techniques and ApplicationsComputer scienceModular designMass spectrometryComputational biologyData scienceData miningChemistryBiologyChromatographyProgramming language

MeSH terms

AlgorithmsSoftwareSoftware DesignMass SpectrometryProteomics

Funding

  • Okinawa Institute of Science and Technology Promotion Corporation
  • Okinawa Institute of Science and Technology Graduate University
  • FP7 Food, Agriculture and Fisheries, Biotechnology
Citations
3,878
FWCI
30.29
field-weighted impact
References
29
Percentile
100%
vs. same field & year
Citations per year
Cited by
Lipidomics from sample preparation to data analysis: a primer
Analytical and Bioanalytical Chemistry · 2019 · 346 citations
The re-emergence of natural products for drug discovery in the genomics era
Nature Reviews Drug Discovery · 2015 · 2,473 citations
Predicting Network Activity from High Throughput Metabolomics
PLoS Computational Biology · 2013 · 946 citations
Metabolomics: beyond biomarkers and towards mechanisms
Nature Reviews Molecular Cell Biology · 2016 · 2,709 citations
References
Locally Weighted Regression: An Approach to Regression Analysis by Local Fitting
Journal of the American Statistical Association · 1988 · 5,429 citations
Data processing for mass spectrometry-based metabolomics
Journal of Chromatography A · 2007 · 594 citations
Random sample consensus
Communications of the ACM · 1981 · 25,051 citations
KEGG: Kyoto Encyclopedia of Genes and Genomes
Nucleic Acids Research · 1999 · 32,330 citations
Highly sensitive feature detection for high resolution LC/MS
BMC Bioinformatics · 2008 · 1,169 citations
KEGG: Kyoto Encyclopedia of Genes and Genomes
Nucleic Acids Research · 2000 · 38,352 citations
Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.