Scinovex
article Open AccessTop 1% cited

Big Data Meets Quantum Chemistry Approximations: The Δ-Machine Learning Approach

Journal of Chemical Theory and Computation · 2015 · Vol. 11(5) · pp. 2087–2096
Raghunathan RamakrishnanPavlo O. DralMatthias RuppO. Anatole von Lilienfeld

Abstract

Chemically accurate and comprehensive studies of the virtual space of all possible molecules are severely limited by the computational cost of quantum chemistry. We introduce a composite strategy that adds machine learning corrections to computationally inexpensive approximate legacy quantum methods. After training, highly accurate predictions of enthalpies, free energies, entropies, and electron correlation energies are possible, for significantly larger molecular sets than used for training. For thermochemical properties of up to 16k isomers of C7H10O2 we present numerical evidence that chemical accuracy can be reached. We also predict electron correlation energy in post Hartree-Fock methods, at the computational cost of Hartree-Fock, and we establish a qualitative relationship between molecular entropy and electron correlation. The transferability of our approach is demonstrated, using semiempirical quantum chemistry and machine learning models trained on 1 and 10% of 134k organic molecules, to reproduce enthalpies of all remaining molecules at density functional theory level of accuracy.

Computational Drug Discovery MethodsMachine Learning in Materials ScienceMetabolomics and Mass Spectrometry StudiesBig dataComputer scienceQuantum chemistryQuantumQuantum chemicalData scienceMachine learningChemistryData miningPhysics

MeSH terms

Machine LearningElectronsIsomerismKetonesQuantum TheoryThermodynamics

Funding

  • U.S. Department of Energy
  • Universität Basel
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • Office of Science
  • Argonne National Laboratory
Citations
848
FWCI
36.85
field-weighted impact
References
51
Percentile
100%
vs. same field & year
Citations per year
References
Generalized Gradient Approximation Made Simple
Physical Review Letters · 1996 · 205,888 citations
Assessment and Validation of Machine Learning Methods for Predicting Molecular Atomization Energies
Journal of Chemical Theory and Computation · 2013 · 634 citations
Gaussian-2 theory for molecular energies of first- and second-row compounds
The Journal of Chemical Physics · 1991 · 3,430 citations
Towards the computational design of solid catalysts
Nature Chemistry · 2009 · 3,986 citations
Click Chemistry: Diverse Chemical Function from a Few Good Reactions
Angewandte Chemie International Edition · 2001 · 9,278 citations
Citation Network

How this paper connects to the literature. Drag to explore, click any node to open that paper.