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Quantitative assessment on the cloning efficiencies of lentiviral transfer vectors with a unique clone site

Scientific Reports · 2012 · Vol. 2(1) · pp. 1–8
Gang ZhangAnurag Tandon

Abstract

Lentiviral vectors (LVs) are powerful tools for transgene expression in vivo and in vitro. However, the construction of LVs is of low efficiency, due to the large sizes and lack of proper clone sites. Therefore, it is critical to develop efficient strategies for cloning LVs. Here, we reported a combinatorial strategy to efficiently construct LVs using EGFP, hPlk2 wild type (WT) and mutant genes as inserts. Firstly, site-directed mutagenesis (SDM) was performed to create BamH I site for the inserts; secondly, pWPI LV was dephosphorylated after BamH I digestion; finally, the amounts and ratios of the insert and vector DNA were optimized to increase monomeric ligation. Our results showed that the total percentage of positive clones was approximately 48%±7.6%. Using this method, almost all the vectors could be constructed through two or three minipreps. Therefore, our study provided an efficient method for constructing large-size vectors.

Virus-based gene therapy researchCRISPR and Genetic EngineeringAnimal Genetics and ReproductionInsert (composites)Cloning (programming)Mutagenesisclone (Java method)Computational biologyBiologyTransgeneMutantVector (molecular biology)Viral vector

MeSH terms

Binding SitesElectrophoresis, Agar GelGenetic VectorsHumansMicroscopy, FluorescenceMutationTransfectionBlotting, WesternReproducibility of ResultsDeoxyribonuclease BamHIDeoxyribonucleases, Type II Site-SpecificLentivirusMutagenesis, Site-DirectedProtein Serine-Threonine KinasesTransgenes

Funding

  • Canadian Institutes of Health Research
Citations
1,026
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